Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSM2Q9Y333 AC138932.3-201ENST00000567634 1902 ntBASIC21.86■■□□□ 1.09
LSM2Q9Y333 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LSM2Q9Y333 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.85■■□□□ 1.09
LSM2Q9Y333 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 MIR762-201ENST00000390236 83 ntBASIC21.85■■□□□ 1.09
LSM2Q9Y333 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.85■■□□□ 1.09
LSM2Q9Y333 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.85■■□□□ 1.09
LSM2Q9Y333 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.85■■□□□ 1.09
LSM2Q9Y333 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LSM2Q9Y333 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSM2Q9Y333 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM2Q9Y333 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LSM2Q9Y333 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
LSM2Q9Y333 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM2Q9Y333 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.84■■□□□ 1.09
LSM2Q9Y333 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LSM2Q9Y333 AC022211.4-201ENST00000625094 2161 ntBASIC21.83■■□□□ 1.09
LSM2Q9Y333 WHAMMP3-201ENST00000611636 1609 ntBASIC21.83■■□□□ 1.08
LSM2Q9Y333 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LSM2Q9Y333 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSM2Q9Y333 AC136428.2-201ENST00000563187 214 ntBASIC21.82■■□□□ 1.08
LSM2Q9Y333 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSM2Q9Y333 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
LSM2Q9Y333 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.81■■□□□ 1.08
LSM2Q9Y333 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.81■■□□□ 1.08
LSM2Q9Y333 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSM2Q9Y333 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSM2Q9Y333 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSM2Q9Y333 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSM2Q9Y333 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.8■■□□□ 1.08
LSM2Q9Y333 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
LSM2Q9Y333 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSM2Q9Y333 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSM2Q9Y333 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LSM2Q9Y333 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSM2Q9Y333 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSM2Q9Y333 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.78■■□□□ 1.08
LSM2Q9Y333 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LSM2Q9Y333 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.78■■□□□ 1.08
LSM2Q9Y333 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSM2Q9Y333 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.78■■□□□ 1.08
LSM2Q9Y333 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSM2Q9Y333 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM2Q9Y333 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LSM2Q9Y333 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM2Q9Y333 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LSM2Q9Y333 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LSM2Q9Y333 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.77■■□□□ 1.08
LSM2Q9Y333 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LSM2Q9Y333 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LSM2Q9Y333 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.77■■□□□ 1.07
LSM2Q9Y333 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LSM2Q9Y333 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSM2Q9Y333 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.76■■□□□ 1.07
LSM2Q9Y333 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.76■■□□□ 1.07
LSM2Q9Y333 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.76■■□□□ 1.07
LSM2Q9Y333 MIR6090-201ENST00000622481 60 ntBASIC21.75■■□□□ 1.07
LSM2Q9Y333 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LSM2Q9Y333 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
LSM2Q9Y333 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LSM2Q9Y333 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LSM2Q9Y333 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
LSM2Q9Y333 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSM2Q9Y333 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSM2Q9Y333 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSM2Q9Y333 AC108673.1-201ENST00000510422 1159 ntBASIC21.74■■□□□ 1.07
LSM2Q9Y333 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSM2Q9Y333 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LSM2Q9Y333 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LSM2Q9Y333 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.73■■□□□ 1.07
LSM2Q9Y333 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSM2Q9Y333 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LSM2Q9Y333 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.73■■□□□ 1.07
LSM2Q9Y333 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSM2Q9Y333 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
LSM2Q9Y333 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
LSM2Q9Y333 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.72■■□□□ 1.07
LSM2Q9Y333 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.72■■□□□ 1.07
LSM2Q9Y333 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LSM2Q9Y333 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
LSM2Q9Y333 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LSM2Q9Y333 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.71■■□□□ 1.07
LSM2Q9Y333 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSM2Q9Y333 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LSM2Q9Y333 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSM2Q9Y333 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LSM2Q9Y333 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.7■■□□□ 1.06
LSM2Q9Y333 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms