Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 AC022517.1-201ENST00000592429 346 ntBASIC10.53□□□□□ -0.72
MACF1Q9UPN3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC10.53□□□□□ -0.72
MACF1Q9UPN3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
MACF1Q9UPN3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC10.52□□□□□ -0.72
MACF1Q9UPN3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 HLA-L-209ENST00000420110 1011 ntBASIC10.52□□□□□ -0.73
MACF1Q9UPN3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 RAP2CP1-202ENST00000605179 643 ntBASIC10.52□□□□□ -0.73
MACF1Q9UPN3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
MACF1Q9UPN3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
MACF1Q9UPN3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
MACF1Q9UPN3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
MACF1Q9UPN3 AC019171.1-201ENST00000601251 1056 ntBASIC10.51□□□□□ -0.73
MACF1Q9UPN3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 AC092028.1-203ENST00000608262 953 ntBASIC10.5□□□□□ -0.73
MACF1Q9UPN3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 AL355001.2-201ENST00000620617 1191 ntBASIC10.5□□□□□ -0.73
MACF1Q9UPN3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC10.5□□□□□ -0.73
MACF1Q9UPN3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 MIR3621-201ENST00000580529 85 ntBASIC10.49□□□□□ -0.73
MACF1Q9UPN3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
MACF1Q9UPN3 RASSF1-AS1-201ENST00000629828 790 ntBASIC10.49□□□□□ -0.73
MACF1Q9UPN3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 AL137784.2-201ENST00000607332 1000 ntBASIC10.48□□□□□ -0.73
MACF1Q9UPN3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 AC021242.3-201ENST00000607598 1377 ntBASIC10.48□□□□□ -0.73
MACF1Q9UPN3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
MACF1Q9UPN3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC10.47□□□□□ -0.73
MACF1Q9UPN3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
MACF1Q9UPN3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
MACF1Q9UPN3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC10.46□□□□□ -0.73
MACF1Q9UPN3 AC066615.1-201ENST00000640911 628 ntBASIC10.46□□□□□ -0.73
MACF1Q9UPN3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
MACF1Q9UPN3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
MACF1Q9UPN3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
MACF1Q9UPN3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC10.46□□□□□ -0.74
MACF1Q9UPN3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 TSPY9P-201ENST00000440215 945 ntBASIC10.45□□□□□ -0.74
MACF1Q9UPN3 TSPY11P-201ENST00000442607 1045 ntBASIC10.45□□□□□ -0.74
MACF1Q9UPN3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
MACF1Q9UPN3 UNC93B3-201ENST00000308076 687 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms