Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.98■■■□□ 2.55
CHMP4BQ9H444 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CHMP4BQ9H444 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.97■■■□□ 2.55
CHMP4BQ9H444 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
CHMP4BQ9H444 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.97■■■□□ 2.55
CHMP4BQ9H444 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CHMP4BQ9H444 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.97■■■□□ 2.55
CHMP4BQ9H444 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
CHMP4BQ9H444 AC091060.1-201ENST00000623524 1766 ntBASIC30.97■■■□□ 2.55
CHMP4BQ9H444 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
CHMP4BQ9H444 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHMP4BQ9H444 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.96■■■□□ 2.55
CHMP4BQ9H444 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.96■■■□□ 2.55
CHMP4BQ9H444 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHMP4BQ9H444 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CHMP4BQ9H444 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CHMP4BQ9H444 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.95■■■□□ 2.54
CHMP4BQ9H444 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHMP4BQ9H444 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHMP4BQ9H444 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.93■■■□□ 2.54
CHMP4BQ9H444 AC145676.1-201ENST00000514988 2004 ntBASIC30.93■■■□□ 2.54
CHMP4BQ9H444 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHMP4BQ9H444 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHMP4BQ9H444 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHMP4BQ9H444 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CHMP4BQ9H444 AC092803.2-201ENST00000564287 1899 ntBASIC30.91■■■□□ 2.54
CHMP4BQ9H444 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHMP4BQ9H444 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CHMP4BQ9H444 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHMP4BQ9H444 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHMP4BQ9H444 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHMP4BQ9H444 AL359504.2-201ENST00000605506 1601 ntBASIC30.88■■■□□ 2.53
CHMP4BQ9H444 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHMP4BQ9H444 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHMP4BQ9H444 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.87■■■□□ 2.53
CHMP4BQ9H444 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CHMP4BQ9H444 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHMP4BQ9H444 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHMP4BQ9H444 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.87■■■□□ 2.53
CHMP4BQ9H444 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHMP4BQ9H444 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.86■■■□□ 2.53
CHMP4BQ9H444 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
CHMP4BQ9H444 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHMP4BQ9H444 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHMP4BQ9H444 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CHMP4BQ9H444 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.85■■■□□ 2.53
CHMP4BQ9H444 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHMP4BQ9H444 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHMP4BQ9H444 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHMP4BQ9H444 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.84■■■□□ 2.53
CHMP4BQ9H444 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.84■■■□□ 2.53
CHMP4BQ9H444 DUSP8P4-201ENST00000399538 1761 ntBASIC30.84■■■□□ 2.53
CHMP4BQ9H444 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.83■■■□□ 2.53
CHMP4BQ9H444 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHMP4BQ9H444 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.82■■■□□ 2.52
CHMP4BQ9H444 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHMP4BQ9H444 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHMP4BQ9H444 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHMP4BQ9H444 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHMP4BQ9H444 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHMP4BQ9H444 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHMP4BQ9H444 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHMP4BQ9H444 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHMP4BQ9H444 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CHMP4BQ9H444 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.8■■■□□ 2.52
CHMP4BQ9H444 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.8■■■□□ 2.52
CHMP4BQ9H444 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CHMP4BQ9H444 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
CHMP4BQ9H444 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.79■■■□□ 2.52
CHMP4BQ9H444 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHMP4BQ9H444 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHMP4BQ9H444 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.77■■■□□ 2.52
CHMP4BQ9H444 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms