Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
RTFDC1Q9BY42 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RTFDC1Q9BY42 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.38■■■□□ 2.45
RTFDC1Q9BY42 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
RTFDC1Q9BY42 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.38■■■□□ 2.45
RTFDC1Q9BY42 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RTFDC1Q9BY42 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
RTFDC1Q9BY42 GUSBP5-201ENST00000418136 578 ntBASIC30.37■■■□□ 2.45
RTFDC1Q9BY42 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
RTFDC1Q9BY42 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.36■■■□□ 2.45
RTFDC1Q9BY42 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RTFDC1Q9BY42 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RTFDC1Q9BY42 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RTFDC1Q9BY42 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RTFDC1Q9BY42 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RTFDC1Q9BY42 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RTFDC1Q9BY42 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
RTFDC1Q9BY42 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RTFDC1Q9BY42 AL359504.2-201ENST00000605506 1601 ntBASIC30.33■■■□□ 2.45
RTFDC1Q9BY42 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RTFDC1Q9BY42 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
RTFDC1Q9BY42 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RTFDC1Q9BY42 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
RTFDC1Q9BY42 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.32■■■□□ 2.44
RTFDC1Q9BY42 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
RTFDC1Q9BY42 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.31■■■□□ 2.44
RTFDC1Q9BY42 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.31■■■□□ 2.44
RTFDC1Q9BY42 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 AC103724.3-201ENST00000564481 992 ntBASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RTFDC1Q9BY42 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTFDC1Q9BY42 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTFDC1Q9BY42 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTFDC1Q9BY42 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RTFDC1Q9BY42 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.29■■■□□ 2.44
RTFDC1Q9BY42 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RTFDC1Q9BY42 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.28■■■□□ 2.44
RTFDC1Q9BY42 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.28■■■□□ 2.44
RTFDC1Q9BY42 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
RTFDC1Q9BY42 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.28■■■□□ 2.44
RTFDC1Q9BY42 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.27■■■□□ 2.44
RTFDC1Q9BY42 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RTFDC1Q9BY42 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RTFDC1Q9BY42 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
RTFDC1Q9BY42 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RTFDC1Q9BY42 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
RTFDC1Q9BY42 THA1P-201ENST00000590384 1145 ntBASIC30.26■■■□□ 2.43
RTFDC1Q9BY42 AC019171.1-201ENST00000601251 1056 ntBASIC30.26■■■□□ 2.43
RTFDC1Q9BY42 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RTFDC1Q9BY42 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
RTFDC1Q9BY42 AC131212.1-201ENST00000613771 668 ntBASIC30.25■■■□□ 2.43
RTFDC1Q9BY42 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTFDC1Q9BY42 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
RTFDC1Q9BY42 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RTFDC1Q9BY42 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.24■■■□□ 2.43
RTFDC1Q9BY42 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTFDC1Q9BY42 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
RTFDC1Q9BY42 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 AL031848.2-201ENST00000607670 837 ntBASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RTFDC1Q9BY42 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RTFDC1Q9BY42 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
RTFDC1Q9BY42 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RTFDC1Q9BY42 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
RTFDC1Q9BY42 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.21■■■□□ 2.43
RTFDC1Q9BY42 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
RTFDC1Q9BY42 AC019069.1-201ENST00000610008 1333 ntBASIC30.21■■■□□ 2.43
RTFDC1Q9BY42 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
RTFDC1Q9BY42 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
RTFDC1Q9BY42 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
RTFDC1Q9BY42 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.19■■■□□ 2.42
RTFDC1Q9BY42 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTFDC1Q9BY42 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTFDC1Q9BY42 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTFDC1Q9BY42 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
RTFDC1Q9BY42 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
RTFDC1Q9BY42 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.17■■■□□ 2.42
RTFDC1Q9BY42 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.17■■■□□ 2.42
RTFDC1Q9BY42 AC087393.1-201ENST00000582896 145 ntBASIC30.17■■■□□ 2.42
RTFDC1Q9BY42 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RTFDC1Q9BY42 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.17■■■□□ 2.42
RTFDC1Q9BY42 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
RTFDC1Q9BY42 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.16■■■□□ 2.42
RTFDC1Q9BY42 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTFDC1Q9BY42 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms