Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PCDH15Q96QU1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH15Q96QU1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDH15Q96QU1 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.37■■□□□ 1.49
PCDH15Q96QU1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDH15Q96QU1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH15Q96QU1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH15Q96QU1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH15Q96QU1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH15Q96QU1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH15Q96QU1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH15Q96QU1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDH15Q96QU1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH15Q96QU1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH15Q96QU1 THA1P-201ENST00000590384 1145 ntBASIC24.35■■□□□ 1.49
PCDH15Q96QU1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH15Q96QU1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH15Q96QU1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDH15Q96QU1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.33■■□□□ 1.49
PCDH15Q96QU1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH15Q96QU1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.33■■□□□ 1.48
PCDH15Q96QU1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDH15Q96QU1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDH15Q96QU1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDH15Q96QU1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDH15Q96QU1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH15Q96QU1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PCDH15Q96QU1 AP002414.2-202ENST00000590929 1450 ntBASIC24.3■■□□□ 1.48
PCDH15Q96QU1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH15Q96QU1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH15Q96QU1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH15Q96QU1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.29■■□□□ 1.48
PCDH15Q96QU1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH15Q96QU1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH15Q96QU1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDH15Q96QU1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH15Q96QU1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH15Q96QU1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH15Q96QU1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH15Q96QU1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PCDH15Q96QU1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH15Q96QU1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH15Q96QU1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH15Q96QU1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PCDH15Q96QU1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.26■■□□□ 1.47
PCDH15Q96QU1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH15Q96QU1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDH15Q96QU1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH15Q96QU1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDH15Q96QU1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH15Q96QU1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PCDH15Q96QU1 AL359504.2-201ENST00000605506 1601 ntBASIC24.25■■□□□ 1.47
PCDH15Q96QU1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH15Q96QU1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH15Q96QU1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH15Q96QU1 AL031848.2-201ENST00000607670 837 ntBASIC24.24■■□□□ 1.47
PCDH15Q96QU1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDH15Q96QU1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH15Q96QU1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH15Q96QU1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH15Q96QU1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH15Q96QU1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH15Q96QU1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDH15Q96QU1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
PCDH15Q96QU1 AL356441.2-201ENST00000443009 864 ntBASIC24.23■■□□□ 1.47
PCDH15Q96QU1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH15Q96QU1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDH15Q96QU1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH15Q96QU1 AC018755.3-202ENST00000596210 929 ntBASIC24.22■■□□□ 1.47
PCDH15Q96QU1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH15Q96QU1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH15Q96QU1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH15Q96QU1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDH15Q96QU1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH15Q96QU1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDH15Q96QU1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH15Q96QU1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH15Q96QU1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH15Q96QU1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH15Q96QU1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH15Q96QU1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms