Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB39BQ96DA2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB39BQ96DA2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB39BQ96DA2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB39BQ96DA2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 AL359258.2-201ENST00000564063 1566 ntBASIC20.79■□□□□ 0.92
RAB39BQ96DA2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB39BQ96DA2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 AC012354.3-201ENST00000623734 483 ntBASIC20.78■□□□□ 0.92
RAB39BQ96DA2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB39BQ96DA2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB39BQ96DA2 BX255925.1-201ENST00000566954 1854 ntBASIC20.77■□□□□ 0.92
RAB39BQ96DA2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.77■□□□□ 0.91
RAB39BQ96DA2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.77■□□□□ 0.91
RAB39BQ96DA2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.77■□□□□ 0.91
RAB39BQ96DA2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 AL157400.5-201ENST00000507624 621 ntBASIC20.76■□□□□ 0.91
RAB39BQ96DA2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB39BQ96DA2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB39BQ96DA2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB39BQ96DA2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB39BQ96DA2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RAB39BQ96DA2 AC018358.1-201ENST00000631079 1402 ntBASIC20.75■□□□□ 0.91
RAB39BQ96DA2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB39BQ96DA2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB39BQ96DA2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB39BQ96DA2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB39BQ96DA2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB39BQ96DA2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB39BQ96DA2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB39BQ96DA2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB39BQ96DA2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB39BQ96DA2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB39BQ96DA2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB39BQ96DA2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB39BQ96DA2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB39BQ96DA2 LINC01003-201ENST00000564834 1764 ntBASIC20.72■□□□□ 0.91
RAB39BQ96DA2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 AC007029.1-201ENST00000604183 313 ntBASIC20.71■□□□□ 0.91
RAB39BQ96DA2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 U85056.1-201ENST00000616429 682 ntBASIC20.71■□□□□ 0.91
RAB39BQ96DA2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB39BQ96DA2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAB39BQ96DA2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB39BQ96DA2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB39BQ96DA2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB39BQ96DA2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB39BQ96DA2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 SMPD5-203ENST00000639008 1464 ntBASIC20.69■□□□□ 0.9
RAB39BQ96DA2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RAB39BQ96DA2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms