Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71LQ8N9Z2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71LQ8N9Z2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC71LQ8N9Z2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC71LQ8N9Z2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC71LQ8N9Z2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC71LQ8N9Z2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC71LQ8N9Z2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71LQ8N9Z2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC71LQ8N9Z2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC71LQ8N9Z2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71LQ8N9Z2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71LQ8N9Z2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC71LQ8N9Z2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC71LQ8N9Z2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71LQ8N9Z2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC71LQ8N9Z2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71LQ8N9Z2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71LQ8N9Z2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71LQ8N9Z2 AC010501.1-201ENST00000606270 1962 ntBASIC20.24■□□□□ 0.83
CCDC71LQ8N9Z2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71LQ8N9Z2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC71LQ8N9Z2 ERN1-208ENST00000606895 2068 ntBASIC20.23■□□□□ 0.83
CCDC71LQ8N9Z2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC71LQ8N9Z2 SUZ12P1-203ENST00000578195 985 ntBASIC20.23■□□□□ 0.83
CCDC71LQ8N9Z2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC71LQ8N9Z2 AC110285.7-201ENST00000624417 1536 ntBASIC20.22■□□□□ 0.83
CCDC71LQ8N9Z2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC71LQ8N9Z2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 AC142381.3-201ENST00000568208 1670 ntBASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71LQ8N9Z2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71LQ8N9Z2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC71LQ8N9Z2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC71LQ8N9Z2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71LQ8N9Z2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71LQ8N9Z2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71LQ8N9Z2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC71LQ8N9Z2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71LQ8N9Z2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71LQ8N9Z2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC71LQ8N9Z2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71LQ8N9Z2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC71LQ8N9Z2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC71LQ8N9Z2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CCDC71LQ8N9Z2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC71LQ8N9Z2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC71LQ8N9Z2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC71LQ8N9Z2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC71LQ8N9Z2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC71LQ8N9Z2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC71LQ8N9Z2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms