Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPSF7Q8N684 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPSF7Q8N684 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.9■■□□□ 1.42
CPSF7Q8N684 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPSF7Q8N684 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.9■■□□□ 1.42
CPSF7Q8N684 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPSF7Q8N684 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPSF7Q8N684 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.89■■□□□ 1.41
CPSF7Q8N684 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.89■■□□□ 1.41
CPSF7Q8N684 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.89■■□□□ 1.41
CPSF7Q8N684 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.89■■□□□ 1.41
CPSF7Q8N684 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CPSF7Q8N684 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CPSF7Q8N684 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPSF7Q8N684 MIR639-201ENST00000384974 98 ntBASIC23.88■■□□□ 1.41
CPSF7Q8N684 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.88■■□□□ 1.41
CPSF7Q8N684 CR559946.2-201ENST00000623684 991 ntBASIC23.88■■□□□ 1.41
CPSF7Q8N684 AC142472.1-201ENST00000612013 1741 ntBASIC23.87■■□□□ 1.41
CPSF7Q8N684 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPSF7Q8N684 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CPSF7Q8N684 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CPSF7Q8N684 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPSF7Q8N684 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.86■■□□□ 1.41
CPSF7Q8N684 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPSF7Q8N684 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPSF7Q8N684 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
CPSF7Q8N684 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.86■■□□□ 1.41
CPSF7Q8N684 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPSF7Q8N684 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPSF7Q8N684 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPSF7Q8N684 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.85■■□□□ 1.41
CPSF7Q8N684 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPSF7Q8N684 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.84■■□□□ 1.41
CPSF7Q8N684 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CPSF7Q8N684 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPSF7Q8N684 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPSF7Q8N684 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.84■■□□□ 1.41
CPSF7Q8N684 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
CPSF7Q8N684 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPSF7Q8N684 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CPSF7Q8N684 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPSF7Q8N684 MIR4449-201ENST00000578365 66 ntBASIC23.83■■□□□ 1.41
CPSF7Q8N684 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CPSF7Q8N684 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CPSF7Q8N684 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.82■■□□□ 1.4
CPSF7Q8N684 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CPSF7Q8N684 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPSF7Q8N684 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.82■■□□□ 1.4
CPSF7Q8N684 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.81■■□□□ 1.4
CPSF7Q8N684 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF7Q8N684 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF7Q8N684 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF7Q8N684 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF7Q8N684 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CPSF7Q8N684 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.8■■□□□ 1.4
CPSF7Q8N684 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF7Q8N684 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.8■■□□□ 1.4
CPSF7Q8N684 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.8■■□□□ 1.4
CPSF7Q8N684 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF7Q8N684 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CPSF7Q8N684 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF7Q8N684 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF7Q8N684 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF7Q8N684 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF7Q8N684 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF7Q8N684 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF7Q8N684 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF7Q8N684 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.79■■□□□ 1.4
CPSF7Q8N684 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.79■■□□□ 1.4
CPSF7Q8N684 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF7Q8N684 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF7Q8N684 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF7Q8N684 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF7Q8N684 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF7Q8N684 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF7Q8N684 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L13-201ENST00000554103 1267 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L15-201ENST00000611059 1267 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L23-201ENST00000615195 1269 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L24-201ENST00000617576 1269 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L22-201ENST00000618238 1269 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L20-201ENST00000619712 1269 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L21-201ENST00000622058 1269 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L10-201ENST00000622460 1267 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 DUX4L25-201ENST00000624915 1269 ntBASIC23.77■■□□□ 1.4
CPSF7Q8N684 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF7Q8N684 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF7Q8N684 ERN1-208ENST00000606895 2068 ntBASIC23.76■■□□□ 1.39
CPSF7Q8N684 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF7Q8N684 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CPSF7Q8N684 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF7Q8N684 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF7Q8N684 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.76■■□□□ 1.39
CPSF7Q8N684 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF7Q8N684 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF7Q8N684 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF7Q8N684 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.75■■□□□ 1.39
CPSF7Q8N684 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
CPSF7Q8N684 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CPSF7Q8N684 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms