Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.38■■□□□ 1.17
LINC00471Q8N535 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LINC00471Q8N535 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LINC00471Q8N535 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LINC00471Q8N535 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
LINC00471Q8N535 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.37■■□□□ 1.17
LINC00471Q8N535 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
LINC00471Q8N535 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.37■■□□□ 1.17
LINC00471Q8N535 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LINC00471Q8N535 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00471Q8N535 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00471Q8N535 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00471Q8N535 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
LINC00471Q8N535 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00471Q8N535 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00471Q8N535 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
LINC00471Q8N535 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LINC00471Q8N535 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LINC00471Q8N535 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
LINC00471Q8N535 AL162393.1-201ENST00000437852 946 ntBASIC22.33■■□□□ 1.17
LINC00471Q8N535 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.33■■□□□ 1.17
LINC00471Q8N535 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LINC00471Q8N535 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.33■■□□□ 1.17
LINC00471Q8N535 AC021231.2-201ENST00000594613 730 ntBASIC22.33■■□□□ 1.17
LINC00471Q8N535 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LINC00471Q8N535 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LINC00471Q8N535 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LINC00471Q8N535 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LINC00471Q8N535 DUX4L29-201ENST00000425409 679 ntBASIC22.32■■□□□ 1.16
LINC00471Q8N535 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
LINC00471Q8N535 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LINC00471Q8N535 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LINC00471Q8N535 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.31■■□□□ 1.16
LINC00471Q8N535 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LINC00471Q8N535 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.31■■□□□ 1.16
LINC00471Q8N535 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.31■■□□□ 1.16
LINC00471Q8N535 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LINC00471Q8N535 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LINC00471Q8N535 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LINC00471Q8N535 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00471Q8N535 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.29■■□□□ 1.16
LINC00471Q8N535 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00471Q8N535 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
LINC00471Q8N535 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINC00471Q8N535 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINC00471Q8N535 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LINC00471Q8N535 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINC00471Q8N535 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.28■■□□□ 1.16
LINC00471Q8N535 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINC00471Q8N535 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
LINC00471Q8N535 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00471Q8N535 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00471Q8N535 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.27■■□□□ 1.16
LINC00471Q8N535 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LINC00471Q8N535 ERN1-208ENST00000606895 2068 ntBASIC22.26■■□□□ 1.15
LINC00471Q8N535 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LINC00471Q8N535 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00471Q8N535 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00471Q8N535 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.26■■□□□ 1.15
LINC00471Q8N535 AC093323.1-202ENST00000635031 2045 ntBASIC22.26■■□□□ 1.15
LINC00471Q8N535 AC142381.3-201ENST00000568208 1670 ntBASIC22.26■■□□□ 1.15
LINC00471Q8N535 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00471Q8N535 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00471Q8N535 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.25■■□□□ 1.15
LINC00471Q8N535 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00471Q8N535 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00471Q8N535 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00471Q8N535 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.25■■□□□ 1.15
LINC00471Q8N535 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.25■■□□□ 1.15
LINC00471Q8N535 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00471Q8N535 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.24■■□□□ 1.15
LINC00471Q8N535 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LINC00471Q8N535 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINC00471Q8N535 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
LINC00471Q8N535 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
LINC00471Q8N535 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
LINC00471Q8N535 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LINC00471Q8N535 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINC00471Q8N535 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINC00471Q8N535 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.22■■□□□ 1.15
LINC00471Q8N535 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.22■■□□□ 1.15
LINC00471Q8N535 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
LINC00471Q8N535 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINC00471Q8N535 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.21■■□□□ 1.15
LINC00471Q8N535 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.21■■□□□ 1.15
LINC00471Q8N535 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.21■■□□□ 1.15
LINC00471Q8N535 AC008813.1-201ENST00000536597 885 ntBASIC22.21■■□□□ 1.15
LINC00471Q8N535 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.21■■□□□ 1.15
LINC00471Q8N535 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LINC00471Q8N535 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINC00471Q8N535 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LINC00471Q8N535 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.21■■□□□ 1.15
LINC00471Q8N535 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.2■■□□□ 1.14
LINC00471Q8N535 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LINC00471Q8N535 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.2■■□□□ 1.14
LINC00471Q8N535 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
LINC00471Q8N535 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LINC00471Q8N535 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.2■■□□□ 1.14
LINC00471Q8N535 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
LINC00471Q8N535 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms