Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 AC026202.3-201ENST00000600805 1127 ntBASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.95■□□□□ 0.94
ARFGEF3Q5TH69 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.95■□□□□ 0.94
ARFGEF3Q5TH69 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF3Q5TH69 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF3Q5TH69 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF3Q5TH69 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ARFGEF3Q5TH69 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ARFGEF3Q5TH69 SPCS2P3-201ENST00000500401 656 ntBASIC20.94■□□□□ 0.94
ARFGEF3Q5TH69 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
ARFGEF3Q5TH69 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
ARFGEF3Q5TH69 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.94■□□□□ 0.94
ARFGEF3Q5TH69 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.94■□□□□ 0.94
ARFGEF3Q5TH69 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ARFGEF3Q5TH69 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ARFGEF3Q5TH69 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ARFGEF3Q5TH69 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF3Q5TH69 RP9P-202ENST00000450133 1212 ntBASIC20.93■□□□□ 0.94
ARFGEF3Q5TH69 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARFGEF3Q5TH69 AL449106.1-201ENST00000608517 1980 ntBASIC20.92■□□□□ 0.94
ARFGEF3Q5TH69 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ARFGEF3Q5TH69 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF3Q5TH69 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ARFGEF3Q5TH69 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.92■□□□□ 0.94
ARFGEF3Q5TH69 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.91■□□□□ 0.94
ARFGEF3Q5TH69 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 MIR3960-201ENST00000583311 91 ntBASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ARFGEF3Q5TH69 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ARFGEF3Q5TH69 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ARFGEF3Q5TH69 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ARFGEF3Q5TH69 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.89■□□□□ 0.94
ARFGEF3Q5TH69 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF3Q5TH69 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ARFGEF3Q5TH69 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF3Q5TH69 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF3Q5TH69 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.88■□□□□ 0.93
ARFGEF3Q5TH69 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF3Q5TH69 RARRES2P1-201ENST00000474487 481 ntBASIC20.88■□□□□ 0.93
ARFGEF3Q5TH69 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
ARFGEF3Q5TH69 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ARFGEF3Q5TH69 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARFGEF3Q5TH69 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ARFGEF3Q5TH69 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.85■□□□□ 0.93
ARFGEF3Q5TH69 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.84■□□□□ 0.93
ARFGEF3Q5TH69 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARFGEF3Q5TH69 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARFGEF3Q5TH69 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARFGEF3Q5TH69 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.84■□□□□ 0.93
ARFGEF3Q5TH69 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
ARFGEF3Q5TH69 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARFGEF3Q5TH69 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARFGEF3Q5TH69 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.83■□□□□ 0.92
ARFGEF3Q5TH69 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 DUX4L18-201ENST00000553347 1267 ntBASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 BX255925.1-201ENST00000566954 1854 ntBASIC20.82■□□□□ 0.92
ARFGEF3Q5TH69 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms