Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KHDC3LQ587J8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KHDC3LQ587J8 LINC00543-201ENST00000567234 1845 ntBASIC19.39■□□□□ 0.7
KHDC3LQ587J8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KHDC3LQ587J8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KHDC3LQ587J8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KHDC3LQ587J8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KHDC3LQ587J8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KHDC3LQ587J8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KHDC3LQ587J8 CLDN5-201ENST00000403084 2357 ntBASIC19.35■□□□□ 0.69
KHDC3LQ587J8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KHDC3LQ587J8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KHDC3LQ587J8 AL391121.1-201ENST00000607967 1349 ntBASIC19.35■□□□□ 0.69
KHDC3LQ587J8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC3LQ587J8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC3LQ587J8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC3LQ587J8 AL139125.2-201ENST00000623134 1869 ntBASIC19.34■□□□□ 0.69
KHDC3LQ587J8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
KHDC3LQ587J8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.34■□□□□ 0.69
KHDC3LQ587J8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC3LQ587J8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC3LQ587J8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC3LQ587J8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.33■□□□□ 0.68
KHDC3LQ587J8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC3LQ587J8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC3LQ587J8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC3LQ587J8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.32■□□□□ 0.68
KHDC3LQ587J8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC3LQ587J8 AC135983.2-203ENST00000454486 1613 ntBASIC19.32■□□□□ 0.68
KHDC3LQ587J8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC3LQ587J8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC3LQ587J8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC3LQ587J8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
KHDC3LQ587J8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC3LQ587J8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.31■□□□□ 0.68
KHDC3LQ587J8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC3LQ587J8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
KHDC3LQ587J8 AP004609.3-201ENST00000610705 1884 ntBASIC19.31■□□□□ 0.68
KHDC3LQ587J8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 AC079834.2-201ENST00000609776 1949 ntBASIC19.3■□□□□ 0.68
KHDC3LQ587J8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC3LQ587J8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
KHDC3LQ587J8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.29■□□□□ 0.68
KHDC3LQ587J8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
KHDC3LQ587J8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
KHDC3LQ587J8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.29■□□□□ 0.68
KHDC3LQ587J8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.28■□□□□ 0.68
KHDC3LQ587J8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KHDC3LQ587J8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC3LQ587J8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC3LQ587J8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC3LQ587J8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms