Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF404Q494X3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF404Q494X3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ZNF404Q494X3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF404Q494X3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF404Q494X3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ZNF404Q494X3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.02■■□□□ 1.12
ZNF404Q494X3 MIR6090-201ENST00000622481 60 ntBASIC22.02■■□□□ 1.12
ZNF404Q494X3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ZNF404Q494X3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
ZNF404Q494X3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
ZNF404Q494X3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
ZNF404Q494X3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF404Q494X3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF404Q494X3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF404Q494X3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.01■■□□□ 1.11
ZNF404Q494X3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ZNF404Q494X3 AC127502.1-201ENST00000399971 1502 ntBASIC22.01■■□□□ 1.11
ZNF404Q494X3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22■■□□□ 1.11
ZNF404Q494X3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22■■□□□ 1.11
ZNF404Q494X3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22■■□□□ 1.11
ZNF404Q494X3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ZNF404Q494X3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ZNF404Q494X3 AC012676.1-201ENST00000574705 1949 ntBASIC22■■□□□ 1.11
ZNF404Q494X3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22■■□□□ 1.11
ZNF404Q494X3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF404Q494X3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF404Q494X3 AC018358.1-201ENST00000631079 1402 ntBASIC21.97■■□□□ 1.11
ZNF404Q494X3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF404Q494X3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.96■■□□□ 1.11
ZNF404Q494X3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
ZNF404Q494X3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF404Q494X3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF404Q494X3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF404Q494X3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 AC142381.3-201ENST00000568208 1670 ntBASIC21.92■■□□□ 1.1
ZNF404Q494X3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 DUX4L29-201ENST00000425409 679 ntBASIC21.92■■□□□ 1.1
ZNF404Q494X3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF404Q494X3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF404Q494X3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF404Q494X3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ZNF404Q494X3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms