Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF404Q494X3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF404Q494X3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ZNF404Q494X3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF404Q494X3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF404Q494X3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ZNF404Q494X3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF404Q494X3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.02■■□□□ 1.12
ZNF404Q494X3 MIR6090-201ENST00000622481 60 ntBASIC22.02■■□□□ 1.12
ZNF404Q494X3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ZNF404Q494X3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
ZNF404Q494X3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
ZNF404Q494X3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
ZNF404Q494X3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF404Q494X3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF404Q494X3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF404Q494X3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.01■■□□□ 1.11
ZNF404Q494X3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ZNF404Q494X3 AC127502.1-201ENST00000399971 1502 ntBASIC22.01■■□□□ 1.11
ZNF404Q494X3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22■■□□□ 1.11
ZNF404Q494X3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22■■□□□ 1.11
ZNF404Q494X3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22■■□□□ 1.11
ZNF404Q494X3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF404Q494X3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ZNF404Q494X3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ZNF404Q494X3 AC012676.1-201ENST00000574705 1949 ntBASIC22■■□□□ 1.11
ZNF404Q494X3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22■■□□□ 1.11
ZNF404Q494X3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF404Q494X3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF404Q494X3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
ZNF404Q494X3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF404Q494X3 AC018358.1-201ENST00000631079 1402 ntBASIC21.97■■□□□ 1.11
ZNF404Q494X3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF404Q494X3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ZNF404Q494X3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.96■■□□□ 1.11
ZNF404Q494X3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF404Q494X3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
ZNF404Q494X3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF404Q494X3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF404Q494X3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF404Q494X3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF404Q494X3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF404Q494X3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF404Q494X3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.1
ZNF404Q494X3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 AC142381.3-201ENST00000568208 1670 ntBASIC21.92■■□□□ 1.1
ZNF404Q494X3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 DUX4L29-201ENST00000425409 679 ntBASIC21.92■■□□□ 1.1
ZNF404Q494X3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF404Q494X3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.92■■□□□ 1.1
ZNF404Q494X3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF404Q494X3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF404Q494X3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF404Q494X3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ZNF404Q494X3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms