Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.74■□□□□ 0.75
VMA21Q3ZAQ7 AC091060.1-201ENST00000623524 1766 ntBASIC19.74■□□□□ 0.75
VMA21Q3ZAQ7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.74■□□□□ 0.75
VMA21Q3ZAQ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VMA21Q3ZAQ7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.74■□□□□ 0.75
VMA21Q3ZAQ7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VMA21Q3ZAQ7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 MIR3648-2-201ENST00000581792 180 ntBASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 MIR3648-1-201ENST00000615959 180 ntBASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VMA21Q3ZAQ7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VMA21Q3ZAQ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 AC145676.1-201ENST00000514988 2004 ntBASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VMA21Q3ZAQ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 AC126177.7-201ENST00000547904 679 ntBASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VMA21Q3ZAQ7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 AL359258.2-201ENST00000564063 1566 ntBASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 AC092803.2-201ENST00000564287 1899 ntBASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VMA21Q3ZAQ7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VMA21Q3ZAQ7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VMA21Q3ZAQ7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VMA21Q3ZAQ7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 AC016575.1-201ENST00000607026 382 ntBASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
VMA21Q3ZAQ7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VMA21Q3ZAQ7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VMA21Q3ZAQ7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VMA21Q3ZAQ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VMA21Q3ZAQ7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.64■□□□□ 0.73
VMA21Q3ZAQ7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VMA21Q3ZAQ7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VMA21Q3ZAQ7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VMA21Q3ZAQ7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.63■□□□□ 0.73
VMA21Q3ZAQ7 MIR7108-201ENST00000614319 87 ntBASIC19.63■□□□□ 0.73
VMA21Q3ZAQ7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.63■□□□□ 0.73
VMA21Q3ZAQ7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VMA21Q3ZAQ7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VMA21Q3ZAQ7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VMA21Q3ZAQ7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VMA21Q3ZAQ7 DUSP8P4-201ENST00000399538 1761 ntBASIC19.61■□□□□ 0.73
VMA21Q3ZAQ7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VMA21Q3ZAQ7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms