Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UBE2AP49459 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBE2AP49459 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UBE2AP49459 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBE2AP49459 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBE2AP49459 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBE2AP49459 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.4■□□□□ 0.06
UBE2AP49459 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.06
UBE2AP49459 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.38■□□□□ 0.05
UBE2AP49459 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.38■□□□□ 0.05
UBE2AP49459 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.38■□□□□ 0.05
UBE2AP49459 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBE2AP49459 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBE2AP49459 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
UBE2AP49459 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L13-201ENST00000554103 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L15-201ENST00000611059 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L11-201ENST00000611504 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L12-201ENST00000614593 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L23-201ENST00000615195 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L24-201ENST00000617576 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L22-201ENST00000618238 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L20-201ENST00000619712 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L14-201ENST00000621227 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L21-201ENST00000622058 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L10-201ENST00000622460 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L25-201ENST00000624915 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
UBE2AP49459 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.36■□□□□ 0.05
UBE2AP49459 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 PKM-203ENST00000389093 2279 ntTSL 5 BASIC15.36■□□□□ 0.05
UBE2AP49459 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.35■□□□□ 0.05
UBE2AP49459 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 ZNRF2P2-203ENST00000454624 420 ntBASIC15.35■□□□□ 0.05
UBE2AP49459 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.35■□□□□ 0.05
UBE2AP49459 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.35■□□□□ 0.05
UBE2AP49459 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.34■□□□□ 0.05
UBE2AP49459 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
UBE2AP49459 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.34■□□□□ 0.05
UBE2AP49459 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.34■□□□□ 0.05
UBE2AP49459 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.34■□□□□ 0.05
UBE2AP49459 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
UBE2AP49459 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBE2AP49459 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC15.33■□□□□ 0.05
UBE2AP49459 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBE2AP49459 SHF-207ENST00000560540 2062 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2AP49459 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 AC008813.1-201ENST00000536597 885 ntBASIC15.33■□□□□ 0.04
UBE2AP49459 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2AP49459 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBE2AP49459 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UBE2AP49459 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2AP49459 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBE2AP49459 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.32■□□□□ 0.04
UBE2AP49459 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2AP49459 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2AP49459 WHAMMP3-201ENST00000611636 1609 ntBASIC15.32■□□□□ 0.04
UBE2AP49459 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2AP49459 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
UBE2AP49459 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBE2AP49459 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.31■□□□□ 0.04
UBE2AP49459 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2AP49459 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2AP49459 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2AP49459 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2AP49459 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBE2AP49459 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.3■□□□□ 0.04
UBE2AP49459 AP004609.3-201ENST00000610705 1884 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms