Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HTR3AP46098 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
HTR3AP46098 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTR3AP46098 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.52■■□□□ 1.2
HTR3AP46098 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HTR3AP46098 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HTR3AP46098 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HTR3AP46098 MIR639-201ENST00000384974 98 ntBASIC22.52■■□□□ 1.2
HTR3AP46098 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.52■■□□□ 1.2
HTR3AP46098 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
HTR3AP46098 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.52■■□□□ 1.2
HTR3AP46098 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTR3AP46098 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.51■■□□□ 1.19
HTR3AP46098 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.5■■□□□ 1.19
HTR3AP46098 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
HTR3AP46098 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTR3AP46098 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.5■■□□□ 1.19
HTR3AP46098 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTR3AP46098 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HTR3AP46098 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HTR3AP46098 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTR3AP46098 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTR3AP46098 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTR3AP46098 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.49■■□□□ 1.19
HTR3AP46098 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTR3AP46098 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTR3AP46098 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.49■■□□□ 1.19
HTR3AP46098 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.48■■□□□ 1.19
HTR3AP46098 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTR3AP46098 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.48■■□□□ 1.19
HTR3AP46098 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HTR3AP46098 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTR3AP46098 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTR3AP46098 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HTR3AP46098 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
HTR3AP46098 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HTR3AP46098 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
HTR3AP46098 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.47■■□□□ 1.19
HTR3AP46098 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HTR3AP46098 AC126177.7-201ENST00000547904 679 ntBASIC22.47■■□□□ 1.19
HTR3AP46098 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
HTR3AP46098 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.47■■□□□ 1.19
HTR3AP46098 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3AP46098 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3AP46098 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3AP46098 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HTR3AP46098 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
HTR3AP46098 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.46■■□□□ 1.19
HTR3AP46098 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
HTR3AP46098 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.45■■□□□ 1.18
HTR3AP46098 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HTR3AP46098 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTR3AP46098 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
HTR3AP46098 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTR3AP46098 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
HTR3AP46098 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.45■■□□□ 1.18
HTR3AP46098 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTR3AP46098 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTR3AP46098 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.44■■□□□ 1.18
HTR3AP46098 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.43■■□□□ 1.18
HTR3AP46098 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HTR3AP46098 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
HTR3AP46098 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.43■■□□□ 1.18
HTR3AP46098 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HTR3AP46098 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
HTR3AP46098 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.42■■□□□ 1.18
HTR3AP46098 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HTR3AP46098 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3AP46098 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.41■■□□□ 1.18
HTR3AP46098 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.41■■□□□ 1.18
HTR3AP46098 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.41■■□□□ 1.18
HTR3AP46098 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.41■■□□□ 1.18
HTR3AP46098 AL359258.2-201ENST00000564063 1566 ntBASIC22.41■■□□□ 1.18
HTR3AP46098 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.4■■□□□ 1.18
HTR3AP46098 AP004609.3-201ENST00000610705 1884 ntBASIC22.4■■□□□ 1.18
HTR3AP46098 AC093323.1-202ENST00000635031 2045 ntBASIC22.4■■□□□ 1.18
HTR3AP46098 AC142472.1-201ENST00000612013 1741 ntBASIC22.4■■□□□ 1.18
HTR3AP46098 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HTR3AP46098 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HTR3AP46098 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HTR3AP46098 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HTR3AP46098 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.39■■□□□ 1.17
HTR3AP46098 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.39■■□□□ 1.17
HTR3AP46098 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
HTR3AP46098 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HTR3AP46098 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HTR3AP46098 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HTR3AP46098 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.37■■□□□ 1.17
HTR3AP46098 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTR3AP46098 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms