Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.86■■■□□ 2.53
PDE6BP35913 AL356441.2-201ENST00000443009 864 ntBASIC30.86■■■□□ 2.53
PDE6BP35913 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
PDE6BP35913 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
PDE6BP35913 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.85■■■□□ 2.53
PDE6BP35913 AL359504.2-201ENST00000605506 1601 ntBASIC30.84■■■□□ 2.53
PDE6BP35913 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
PDE6BP35913 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PDE6BP35913 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDE6BP35913 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDE6BP35913 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
PDE6BP35913 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
PDE6BP35913 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE6BP35913 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE6BP35913 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
PDE6BP35913 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.83■■■□□ 2.53
PDE6BP35913 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE6BP35913 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE6BP35913 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
PDE6BP35913 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.82■■■□□ 2.52
PDE6BP35913 AC019171.1-201ENST00000601251 1056 ntBASIC30.82■■■□□ 2.52
PDE6BP35913 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
PDE6BP35913 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
PDE6BP35913 ABCB10P3-201ENST00000561950 2166 ntBASIC30.81■■■□□ 2.52
PDE6BP35913 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PDE6BP35913 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDE6BP35913 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PDE6BP35913 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.8■■■□□ 2.52
PDE6BP35913 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE6BP35913 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE6BP35913 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.78■■■□□ 2.52
PDE6BP35913 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
PDE6BP35913 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.78■■■□□ 2.52
PDE6BP35913 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PDE6BP35913 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PDE6BP35913 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.77■■■□□ 2.52
PDE6BP35913 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDE6BP35913 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.77■■■□□ 2.52
PDE6BP35913 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.76■■■□□ 2.51
PDE6BP35913 AL139393.2-201ENST00000608721 2025 ntBASIC30.75■■■□□ 2.51
PDE6BP35913 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PDE6BP35913 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.74■■■□□ 2.51
PDE6BP35913 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE6BP35913 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PDE6BP35913 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.74■■■□□ 2.51
PDE6BP35913 AC239859.2-201ENST00000444165 318 ntBASIC30.74■■■□□ 2.51
PDE6BP35913 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.74■■■□□ 2.51
PDE6BP35913 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE6BP35913 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDE6BP35913 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.73■■■□□ 2.51
PDE6BP35913 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDE6BP35913 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDE6BP35913 AC087393.1-201ENST00000582896 145 ntBASIC30.72■■■□□ 2.51
PDE6BP35913 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.71■■■□□ 2.51
PDE6BP35913 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
PDE6BP35913 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.71■■■□□ 2.51
PDE6BP35913 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDE6BP35913 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
PDE6BP35913 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
PDE6BP35913 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.7■■■□□ 2.51
PDE6BP35913 Z92544.1-202ENST00000571933 1220 ntBASIC30.7■■■□□ 2.51
PDE6BP35913 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDE6BP35913 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PDE6BP35913 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.69■■■□□ 2.5
PDE6BP35913 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PDE6BP35913 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDE6BP35913 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDE6BP35913 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDE6BP35913 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.68■■■□□ 2.5
PDE6BP35913 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.68■■■□□ 2.5
PDE6BP35913 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDE6BP35913 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
PDE6BP35913 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.68■■■□□ 2.5
PDE6BP35913 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.67■■■□□ 2.5
PDE6BP35913 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDE6BP35913 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PDE6BP35913 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.67■■■□□ 2.5
PDE6BP35913 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PDE6BP35913 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.67■■■□□ 2.5
PDE6BP35913 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.67■■■□□ 2.5
PDE6BP35913 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE6BP35913 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDE6BP35913 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.66■■■□□ 2.5
PDE6BP35913 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE6BP35913 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE6BP35913 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE6BP35913 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.66■■■□□ 2.5
PDE6BP35913 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDE6BP35913 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PDE6BP35913 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PDE6BP35913 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PDE6BP35913 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDE6BP35913 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
PDE6BP35913 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.64■■■□□ 2.5
PDE6BP35913 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.64■■■□□ 2.5
PDE6BP35913 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PDE6BP35913 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.63■■■□□ 2.49
PDE6BP35913 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PDE6BP35913 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.62■■■□□ 2.49
PDE6BP35913 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms