Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1AP19438 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1AP19438 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1AP19438 AC007029.1-201ENST00000604183 313 ntBASIC20.79■□□□□ 0.92
TNFRSF1AP19438 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1AP19438 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1AP19438 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1AP19438 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1AP19438 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF1AP19438 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF1AP19438 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.77■□□□□ 0.92
TNFRSF1AP19438 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TNFRSF1AP19438 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF1AP19438 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TNFRSF1AP19438 RP9P-202ENST00000450133 1212 ntBASIC20.76■□□□□ 0.91
TNFRSF1AP19438 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFRSF1AP19438 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TNFRSF1AP19438 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1AP19438 AC142472.1-201ENST00000612013 1741 ntBASIC20.75■□□□□ 0.91
TNFRSF1AP19438 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TNFRSF1AP19438 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1AP19438 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1AP19438 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFRSF1AP19438 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 AP004609.3-201ENST00000610705 1884 ntBASIC20.74■□□□□ 0.91
TNFRSF1AP19438 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1AP19438 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1AP19438 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TNFRSF1AP19438 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFRSF1AP19438 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1AP19438 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1AP19438 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1AP19438 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1AP19438 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1AP19438 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.71■□□□□ 0.91
TNFRSF1AP19438 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF1AP19438 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFRSF1AP19438 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFRSF1AP19438 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TNFRSF1AP19438 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TNFRSF1AP19438 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1AP19438 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFRSF1AP19438 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TNFRSF1AP19438 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.69■□□□□ 0.9
TNFRSF1AP19438 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1AP19438 AC093536.1-201ENST00000569153 554 ntBASIC20.69■□□□□ 0.9
TNFRSF1AP19438 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFRSF1AP19438 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.69■□□□□ 0.9
TNFRSF1AP19438 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 NTF6A-201ENST00000591175 560 ntBASIC20.68■□□□□ 0.9
TNFRSF1AP19438 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFRSF1AP19438 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 AC133552.2-201ENST00000619106 1032 ntBASIC20.67■□□□□ 0.9
TNFRSF1AP19438 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TNFRSF1AP19438 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TNFRSF1AP19438 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1AP19438 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1AP19438 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1AP19438 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1AP19438 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TNFRSF1AP19438 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFRSF1AP19438 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.64■□□□□ 0.9
TNFRSF1AP19438 AC026202.3-201ENST00000600805 1127 ntBASIC20.64■□□□□ 0.89
TNFRSF1AP19438 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.64■□□□□ 0.89
TNFRSF1AP19438 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFRSF1AP19438 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF1AP19438 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFRSF1AP19438 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1AP19438 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFRSF1AP19438 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms