Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAX4O43316 AL121749.1-202ENST00000609313 2153 ntBASIC17.38■□□□□ 0.37
PAX4O43316 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAX4O43316 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAX4O43316 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAX4O43316 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAX4O43316 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAX4O43316 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAX4O43316 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAX4O43316 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PAX4O43316 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.36■□□□□ 0.37
PAX4O43316 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAX4O43316 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAX4O43316 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAX4O43316 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAX4O43316 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAX4O43316 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.35■□□□□ 0.37
PAX4O43316 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PAX4O43316 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAX4O43316 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAX4O43316 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.35■□□□□ 0.37
PAX4O43316 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.35■□□□□ 0.37
PAX4O43316 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PAX4O43316 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAX4O43316 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PAX4O43316 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.34■□□□□ 0.37
PAX4O43316 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.34■□□□□ 0.37
PAX4O43316 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PAX4O43316 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAX4O43316 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PAX4O43316 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PAX4O43316 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PAX4O43316 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PAX4O43316 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAX4O43316 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.33■□□□□ 0.36
PAX4O43316 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PAX4O43316 AP004609.3-201ENST00000610705 1884 ntBASIC17.33■□□□□ 0.36
PAX4O43316 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PAX4O43316 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.32■□□□□ 0.36
PAX4O43316 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAX4O43316 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.32■□□□□ 0.36
PAX4O43316 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAX4O43316 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
PAX4O43316 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAX4O43316 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.31■□□□□ 0.36
PAX4O43316 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.31■□□□□ 0.36
PAX4O43316 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.31■□□□□ 0.36
PAX4O43316 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.31■□□□□ 0.36
PAX4O43316 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAX4O43316 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 AC022413.1-201ENST00000624602 984 ntBASIC17.3■□□□□ 0.36
PAX4O43316 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.3■□□□□ 0.36
PAX4O43316 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PAX4O43316 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.29■□□□□ 0.36
PAX4O43316 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PAX4O43316 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.29■□□□□ 0.36
PAX4O43316 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAX4O43316 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PAX4O43316 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PAX4O43316 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.28■□□□□ 0.36
PAX4O43316 AC142472.1-201ENST00000612013 1741 ntBASIC17.28■□□□□ 0.36
PAX4O43316 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PAX4O43316 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PAX4O43316 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.28■□□□□ 0.36
PAX4O43316 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PAX4O43316 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.28■□□□□ 0.36
PAX4O43316 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PAX4O43316 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PAX4O43316 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAX4O43316 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.28■□□□□ 0.36
PAX4O43316 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PAX4O43316 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PAX4O43316 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PAX4O43316 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.27■□□□□ 0.35
PAX4O43316 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.27■□□□□ 0.35
PAX4O43316 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX4O43316 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX4O43316 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PAX4O43316 AC060814.1-201ENST00000554326 538 ntBASIC17.26■□□□□ 0.35
PAX4O43316 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX4O43316 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX4O43316 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PAX4O43316 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.25■□□□□ 0.35
PAX4O43316 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms