Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIRPB1O00241 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIRPB1O00241 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIRPB1O00241 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIRPB1O00241 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SIRPB1O00241 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SIRPB1O00241 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SIRPB1O00241 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.64■□□□□ 0.89
SIRPB1O00241 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SIRPB1O00241 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.64■□□□□ 0.89
SIRPB1O00241 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIRPB1O00241 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIRPB1O00241 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.64■□□□□ 0.89
SIRPB1O00241 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.64■□□□□ 0.89
SIRPB1O00241 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIRPB1O00241 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIRPB1O00241 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIRPB1O00241 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIRPB1O00241 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SIRPB1O00241 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIRPB1O00241 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SIRPB1O00241 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SIRPB1O00241 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SIRPB1O00241 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIRPB1O00241 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIRPB1O00241 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.63■□□□□ 0.89
SIRPB1O00241 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.62■□□□□ 0.89
SIRPB1O00241 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.62■□□□□ 0.89
SIRPB1O00241 AL359258.2-201ENST00000564063 1566 ntBASIC20.62■□□□□ 0.89
SIRPB1O00241 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.62■□□□□ 0.89
SIRPB1O00241 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.62■□□□□ 0.89
SIRPB1O00241 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SIRPB1O00241 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.61■□□□□ 0.89
SIRPB1O00241 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.61■□□□□ 0.89
SIRPB1O00241 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIRPB1O00241 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIRPB1O00241 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIRPB1O00241 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIRPB1O00241 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIRPB1O00241 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIRPB1O00241 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
SIRPB1O00241 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIRPB1O00241 AC092803.2-201ENST00000564287 1899 ntBASIC20.6■□□□□ 0.89
SIRPB1O00241 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIRPB1O00241 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIRPB1O00241 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SIRPB1O00241 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIRPB1O00241 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIRPB1O00241 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SIRPB1O00241 AC145676.1-201ENST00000514988 2004 ntBASIC20.58■□□□□ 0.88
SIRPB1O00241 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.58■□□□□ 0.88
SIRPB1O00241 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIRPB1O00241 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIRPB1O00241 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.57■□□□□ 0.88
SIRPB1O00241 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIRPB1O00241 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIRPB1O00241 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIRPB1O00241 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIRPB1O00241 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SIRPB1O00241 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.56■□□□□ 0.88
SIRPB1O00241 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.56■□□□□ 0.88
SIRPB1O00241 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIRPB1O00241 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.56■□□□□ 0.88
SIRPB1O00241 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIRPB1O00241 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SIRPB1O00241 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SIRPB1O00241 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIRPB1O00241 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SIRPB1O00241 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.55■□□□□ 0.88
SIRPB1O00241 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.55■□□□□ 0.88
SIRPB1O00241 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIRPB1O00241 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.55■□□□□ 0.88
SIRPB1O00241 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIRPB1O00241 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SIRPB1O00241 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.54■□□□□ 0.88
SIRPB1O00241 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.54■□□□□ 0.88
SIRPB1O00241 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SIRPB1O00241 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIRPB1O00241 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.53■□□□□ 0.88
SIRPB1O00241 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIRPB1O00241 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SIRPB1O00241 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.53■□□□□ 0.88
SIRPB1O00241 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIRPB1O00241 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SIRPB1O00241 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIRPB1O00241 AC126177.7-201ENST00000547904 679 ntBASIC20.52■□□□□ 0.88
SIRPB1O00241 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIRPB1O00241 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SIRPB1O00241 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPB1O00241 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.51■□□□□ 0.87
SIRPB1O00241 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPB1O00241 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPB1O00241 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.51■□□□□ 0.87
SIRPB1O00241 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms