Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	KAR1	YNL188W	1302 nt		7.46	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	HXT8	YJL214W	1710 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	TRP1	YDR007W	675 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	RPL2A	YFR031C-A	765 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	ORM1	YGR038W	669 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YGR168C	YGR168C	1131 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	CTK2	YJL006C	972 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	ERP2	YAL007C	648 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SNF7	YLR025W	723 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	NMT1	YLR195C	1368 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	HER2	YMR293C	1395 nt		7.45	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	KRE28	YDR532C	1158 nt		7.44	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	TCA17	YEL048C	459 nt		7.44	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	REV7	YIL139C	738 nt		7.44	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	DAL2	YIR029W	1032 nt		7.44	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SPG5	YMR191W	1122 nt		7.44	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SKY1	YMR216C	2229 nt		7.44	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YKR018C	YKR018C	2178 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	ARO9	YHR137W	1542 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SNU71	YGR013W	1863 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YDL241W	YDL241W	372 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	ATP12	YJL180C	978 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YMR075C-A	YMR075C-A	366 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	CHS5	YLR330W	2016 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	TPO1	YLL028W	1761 nt		7.43	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	RTN1	YDR233C	888 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YEA4	YEL004W	1029 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	PCL6	YER059W	1263 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SAW1	YAL027W	786 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	RPF2	YKR081C	1035 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	VPS20	YMR077C	666 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YAP7	YOL028C	738 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	PRE10	YOR362C	867 nt		7.42	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	IPI3	YNL182C	1668 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	MSP1	YGR028W	1089 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SNP1	YIL061C	903 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	VTA1	YLR181C	993 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	GTR1	YML121W	933 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YIF1	YNL263C	945 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	PHA2	YNL316C	1005 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	GPI18	YBR004C	1302 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SPS22	YCL048W	1392 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	CLN1	YMR199W	1641 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	GAA1	YLR088W	1845 nt		7.41	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	ATG29	YPL166W	642 nt		7.4	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	SRF1	YDL133W	1314 nt		7.4	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	YFL052W	YFL052W	1398 nt		7.4	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	BUD9	YGR041W	1644 nt		7.4	□□□□□ -1.22
TY4B-P	A0A0B7P3V8	MET13	YGL125W	1803 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	HAS1	YMR290C	1518 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	NOG2	YNR053C	1461 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	MUM3	YOR298W	1440 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	TIM50	YPL063W	1431 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	ERP5	YHR110W	639 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YNR001W-A	YNR001W-A	219 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	RFS1	YBR052C	633 nt		7.39	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	RPC53	YDL150W	1269 nt		7.38	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	SEC28	YIL076W	891 nt		7.38	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	IRC14	YOR135C	342 nt		7.38	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	RRP15	YPR143W	753 nt		7.38	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	SGF73	YGL066W	1974 nt		7.38	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	CMR1	YDL156W	1569 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	RKM4	YDR257C	1485 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	TKL2	YBR117C	2046 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YPR084W	YPR084W	1371 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	PCL9	YDL179W	915 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	PMU1	YKL128C	888 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YBL029C-A	YBL029C-A	285 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YMR206W	YMR206W	942 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	ELP6	YMR312W	822 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YIP3	YNL044W	531 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	BXI1	YNL305C	894 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YBR089W	YBR089W	600 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YKR015C	YKR015C	1707 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	MTC6	YHR151C	1581 nt		7.37	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	HXT15	YDL245C	1704 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	HXT16	YJR158W	1704 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	FRE5	YOR384W	2085 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YCR006C	YCR006C	474 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	PET18	YCR020C	648 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	SUT1	YGL162W	900 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	CDA2	YLR308W	939 nt		7.36	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	UBC5	YDR059C	447 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YER156C	YER156C	1017 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YJL160C	YJL160C	864 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	TES1	YJR019C	1050 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	CDC11	YJR076C	1248 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	CDA1	YLR307W	906 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	RPS6A	YPL090C	711 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	RPS6B	YBR181C	711 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	JIP4	YDR475C	2631 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	JHD1	YER051W	1479 nt		7.35	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	TOS1	YBR162C	1368 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	TOD6	YBL054W	1578 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	PAF1	YBR279W	1338 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	OCA4	YCR095C	1089 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YLR030W	YLR030W	792 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	PCD1	YLR151C	1023 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	MTG1	YMR097C	1104 nt		7.34	□□□□□ -1.23
TY4B-P	A0A0B7P3V8	YNL226W	YNL226W	411 nt		7.34	□□□□□ -1.23

Retrieved 100 of 7,029 protein–RNA pairs in 195.2 ms