Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 AC068473.5-201ENST00000616428 2072 ntBASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 CEBPA-AS1-201ENST00000592982 2198 ntBASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV22A0A0B4J277 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV22A0A0B4J277 PKD1P6-201ENST00000343738 4769 ntBASIC13.89□□□□□ -0.19
TRAV22A0A0B4J277 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV22A0A0B4J277 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV22A0A0B4J277 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV22A0A0B4J277 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV22A0A0B4J277 AL024507.2-201ENST00000606070 2574 ntBASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV22A0A0B4J277 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV22A0A0B4J277 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV22A0A0B4J277 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV22A0A0B4J277 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV22A0A0B4J277 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV22A0A0B4J277 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV22A0A0B4J277 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV22A0A0B4J277 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAV22A0A0B4J277 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV22A0A0B4J277 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV22A0A0B4J277 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV22A0A0B4J277 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV22A0A0B4J277 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 PREB-202ENST00000406567 1910 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms