Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV1A0A0A0MS02 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV1A0A0A0MS02 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRGV1A0A0A0MS02 AC142472.1-201ENST00000612013 1741 ntBASIC17.69■□□□□ 0.42
TRGV1A0A0A0MS02 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.69■□□□□ 0.42
TRGV1A0A0A0MS02 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV1A0A0A0MS02 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRGV1A0A0A0MS02 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV1A0A0A0MS02 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV1A0A0A0MS02 AL359258.2-201ENST00000564063 1566 ntBASIC17.68■□□□□ 0.42
TRGV1A0A0A0MS02 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV1A0A0A0MS02 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV1A0A0A0MS02 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.67■□□□□ 0.42
TRGV1A0A0A0MS02 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRGV1A0A0A0MS02 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV1A0A0A0MS02 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV1A0A0A0MS02 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 AC126177.7-201ENST00000547904 679 ntBASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRGV1A0A0A0MS02 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRGV1A0A0A0MS02 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.64■□□□□ 0.42
TRGV1A0A0A0MS02 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRGV1A0A0A0MS02 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV1A0A0A0MS02 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV1A0A0A0MS02 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV1A0A0A0MS02 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV1A0A0A0MS02 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRGV1A0A0A0MS02 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV1A0A0A0MS02 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV1A0A0A0MS02 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV1A0A0A0MS02 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV1A0A0A0MS02 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV1A0A0A0MS02 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV1A0A0A0MS02 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV1A0A0A0MS02 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.6■□□□□ 0.41
TRGV1A0A0A0MS02 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV1A0A0A0MS02 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV1A0A0A0MS02 MIR639-201ENST00000384974 98 ntBASIC17.6■□□□□ 0.41
TRGV1A0A0A0MS02 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV1A0A0A0MS02 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV1A0A0A0MS02 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV1A0A0A0MS02 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV1A0A0A0MS02 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV1A0A0A0MS02 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV1A0A0A0MS02 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRGV1A0A0A0MS02 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV1A0A0A0MS02 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.58■□□□□ 0.4
TRGV1A0A0A0MS02 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms