Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SAA2-SAA4A0A096LPE2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SAA2-SAA4A0A096LPE2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.05■□□□□ 0.8
SAA2-SAA4A0A096LPE2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAA2-SAA4A0A096LPE2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.04■□□□□ 0.8
SAA2-SAA4A0A096LPE2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.04■□□□□ 0.8
SAA2-SAA4A0A096LPE2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAA2-SAA4A0A096LPE2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AC145676.1-201ENST00000514988 2004 ntBASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AC092803.2-201ENST00000564287 1899 ntBASIC20.03■□□□□ 0.8
SAA2-SAA4A0A096LPE2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 MIR7108-201ENST00000614319 87 ntBASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAA2-SAA4A0A096LPE2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 AL359258.2-201ENST00000564063 1566 ntBASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAA2-SAA4A0A096LPE2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA2-SAA4A0A096LPE2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA2-SAA4A0A096LPE2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA2-SAA4A0A096LPE2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20■□□□□ 0.79
SAA2-SAA4A0A096LPE2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA2-SAA4A0A096LPE2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SAA2-SAA4A0A096LPE2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA2-SAA4A0A096LPE2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SAA2-SAA4A0A096LPE2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SAA2-SAA4A0A096LPE2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SAA2-SAA4A0A096LPE2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.98■□□□□ 0.79
SAA2-SAA4A0A096LPE2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SAA2-SAA4A0A096LPE2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SAA2-SAA4A0A096LPE2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SAA2-SAA4A0A096LPE2 DUSP8P4-201ENST00000399538 1761 ntBASIC19.95■□□□□ 0.78
SAA2-SAA4A0A096LPE2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SAA2-SAA4A0A096LPE2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SAA2-SAA4A0A096LPE2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.95■□□□□ 0.78
SAA2-SAA4A0A096LPE2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.95■□□□□ 0.78
SAA2-SAA4A0A096LPE2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SAA2-SAA4A0A096LPE2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 AC126177.7-201ENST00000547904 679 ntBASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA2-SAA4A0A096LPE2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SAA2-SAA4A0A096LPE2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SAA2-SAA4A0A096LPE2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.92■□□□□ 0.78
SAA2-SAA4A0A096LPE2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SAA2-SAA4A0A096LPE2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SAA2-SAA4A0A096LPE2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 AL359504.2-201ENST00000605506 1601 ntBASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA2-SAA4A0A096LPE2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms