Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP4-1Q9BYQ7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
KRTAP4-1Q9BYQ7 ABCB10P3-201ENST00000561950 2166 ntBASIC13.08□□□□□ -0.31
KRTAP4-1Q9BYQ7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP4-1Q9BYQ7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP4-1Q9BYQ7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP4-1Q9BYQ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.08□□□□□ -0.32
KRTAP4-1Q9BYQ7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC13.08□□□□□ -0.32
KRTAP4-1Q9BYQ7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP4-1Q9BYQ7 AL139393.2-201ENST00000608721 2025 ntBASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP4-1Q9BYQ7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 MIR6765-201ENST00000614092 87 ntBASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KRTAP4-1Q9BYQ7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KRTAP4-1Q9BYQ7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 AC139795.1-202ENST00000500444 432 ntBASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KRTAP4-1Q9BYQ7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KRTAP4-1Q9BYQ7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KRTAP4-1Q9BYQ7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 GUSBP5-201ENST00000418136 578 ntBASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 MIR3960-201ENST00000583311 91 ntBASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 THA1P-201ENST00000590384 1145 ntBASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 AC131212.1-201ENST00000613771 668 ntBASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 AC074183.2-201ENST00000623112 922 ntBASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KRTAP4-1Q9BYQ7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 AC103724.3-201ENST00000564481 992 ntBASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 AP002414.2-202ENST00000590929 1450 ntBASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 AL359504.2-201ENST00000605506 1601 ntBASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC13.01□□□□□ -0.33
KRTAP4-1Q9BYQ7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC13□□□□□ -0.33
KRTAP4-1Q9BYQ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
KRTAP4-1Q9BYQ7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms