Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TNPO1Q92973 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TNPO1Q92973 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
TNPO1Q92973 DUSP8P4-201ENST00000399538 1761 ntBASIC29.31■■■□□ 2.28
TNPO1Q92973 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TNPO1Q92973 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.3■■■□□ 2.28
TNPO1Q92973 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
TNPO1Q92973 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
TNPO1Q92973 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TNPO1Q92973 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC29.29■■■□□ 2.28
TNPO1Q92973 AC093323.1-202ENST00000635031 2045 ntBASIC29.29■■■□□ 2.28
TNPO1Q92973 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
TNPO1Q92973 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC29.28■■■□□ 2.28
TNPO1Q92973 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
TNPO1Q92973 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.28■■■□□ 2.28
TNPO1Q92973 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.28■■■□□ 2.28
TNPO1Q92973 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TNPO1Q92973 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.28■■■□□ 2.28
TNPO1Q92973 DUX4L11-201ENST00000611504 1267 ntBASIC29.28■■■□□ 2.28
TNPO1Q92973 DUX4L12-201ENST00000614593 1267 ntBASIC29.28■■■□□ 2.28
TNPO1Q92973 DUX4L14-201ENST00000621227 1267 ntBASIC29.28■■■□□ 2.28
TNPO1Q92973 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.28■■■□□ 2.28
TNPO1Q92973 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TNPO1Q92973 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.28■■■□□ 2.28
TNPO1Q92973 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.27■■■□□ 2.28
TNPO1Q92973 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
TNPO1Q92973 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
TNPO1Q92973 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
TNPO1Q92973 AC092803.2-201ENST00000564287 1899 ntBASIC29.26■■■□□ 2.27
TNPO1Q92973 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
TNPO1Q92973 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
TNPO1Q92973 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.25■■■□□ 2.27
TNPO1Q92973 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.25■■■□□ 2.27
TNPO1Q92973 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
TNPO1Q92973 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
TNPO1Q92973 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.24■■■□□ 2.27
TNPO1Q92973 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.24■■■□□ 2.27
TNPO1Q92973 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.24■■■□□ 2.27
TNPO1Q92973 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.23■■■□□ 2.27
TNPO1Q92973 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TNPO1Q92973 MIR3648-2-201ENST00000581792 180 ntBASIC29.23■■■□□ 2.27
TNPO1Q92973 MIR3648-1-201ENST00000615959 180 ntBASIC29.23■■■□□ 2.27
TNPO1Q92973 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TNPO1Q92973 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
TNPO1Q92973 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TNPO1Q92973 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TNPO1Q92973 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
TNPO1Q92973 MIR639-201ENST00000384974 98 ntBASIC29.22■■■□□ 2.27
TNPO1Q92973 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.22■■■□□ 2.27
TNPO1Q92973 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.22■■■□□ 2.27
TNPO1Q92973 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
TNPO1Q92973 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
TNPO1Q92973 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.21■■■□□ 2.27
TNPO1Q92973 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
TNPO1Q92973 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.2■■■□□ 2.27
TNPO1Q92973 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
TNPO1Q92973 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
TNPO1Q92973 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TNPO1Q92973 AC135983.2-203ENST00000454486 1613 ntBASIC29.2■■■□□ 2.26
TNPO1Q92973 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TNPO1Q92973 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
TNPO1Q92973 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
TNPO1Q92973 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TNPO1Q92973 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
TNPO1Q92973 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TNPO1Q92973 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
TNPO1Q92973 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
TNPO1Q92973 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
TNPO1Q92973 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.17■■■□□ 2.26
TNPO1Q92973 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.16■■■□□ 2.26
TNPO1Q92973 AC016575.1-201ENST00000607026 382 ntBASIC29.16■■■□□ 2.26
TNPO1Q92973 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
TNPO1Q92973 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
TNPO1Q92973 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
TNPO1Q92973 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TNPO1Q92973 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TNPO1Q92973 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
TNPO1Q92973 MIR4449-201ENST00000578365 66 ntBASIC29.14■■■□□ 2.26
TNPO1Q92973 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TNPO1Q92973 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TNPO1Q92973 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.13■■■□□ 2.25
TNPO1Q92973 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
TNPO1Q92973 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TNPO1Q92973 WHAMMP2-203ENST00000563942 1603 ntBASIC29.12■■■□□ 2.25
TNPO1Q92973 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TNPO1Q92973 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.12■■■□□ 2.25
TNPO1Q92973 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.12■■■□□ 2.25
TNPO1Q92973 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.12■■■□□ 2.25
TNPO1Q92973 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.12■■■□□ 2.25
TNPO1Q92973 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TNPO1Q92973 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
TNPO1Q92973 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L13-201ENST00000554103 1267 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L15-201ENST00000611059 1267 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L23-201ENST00000615195 1269 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L24-201ENST00000617576 1269 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L22-201ENST00000618238 1269 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L20-201ENST00000619712 1269 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L21-201ENST00000622058 1269 ntBASIC29.11■■■□□ 2.25
TNPO1Q92973 DUX4L10-201ENST00000622460 1267 ntBASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms