Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCHD4Q6ZW05 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 AP004609.3-201ENST00000610705 1884 ntBASIC22.56■■□□□ 1.2
PTCHD4Q6ZW05 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PTCHD4Q6ZW05 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCHD4Q6ZW05 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PTCHD4Q6ZW05 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCHD4Q6ZW05 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCHD4Q6ZW05 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCHD4Q6ZW05 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.53■■□□□ 1.2
PTCHD4Q6ZW05 AC044849.2-201ENST00000606596 710 ntBASIC22.53■■□□□ 1.2
PTCHD4Q6ZW05 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCHD4Q6ZW05 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCHD4Q6ZW05 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCHD4Q6ZW05 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCHD4Q6ZW05 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PTCHD4Q6ZW05 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCHD4Q6ZW05 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCHD4Q6ZW05 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCHD4Q6ZW05 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCHD4Q6ZW05 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PTCHD4Q6ZW05 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCHD4Q6ZW05 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCHD4Q6ZW05 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 AC093323.1-202ENST00000635031 2045 ntBASIC22.47■■□□□ 1.19
PTCHD4Q6ZW05 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCHD4Q6ZW05 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCHD4Q6ZW05 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCHD4Q6ZW05 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.46■■□□□ 1.19
PTCHD4Q6ZW05 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PTCHD4Q6ZW05 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PTCHD4Q6ZW05 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.45■■□□□ 1.19
PTCHD4Q6ZW05 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCHD4Q6ZW05 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCHD4Q6ZW05 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PTCHD4Q6ZW05 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCHD4Q6ZW05 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCHD4Q6ZW05 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCHD4Q6ZW05 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCHD4Q6ZW05 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCHD4Q6ZW05 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCHD4Q6ZW05 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.44■■□□□ 1.18
PTCHD4Q6ZW05 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCHD4Q6ZW05 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCHD4Q6ZW05 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCHD4Q6ZW05 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCHD4Q6ZW05 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCHD4Q6ZW05 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCHD4Q6ZW05 AC021231.2-201ENST00000594613 730 ntBASIC22.42■■□□□ 1.18
PTCHD4Q6ZW05 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.42■■□□□ 1.18
PTCHD4Q6ZW05 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.42■■□□□ 1.18
PTCHD4Q6ZW05 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCHD4Q6ZW05 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCHD4Q6ZW05 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCHD4Q6ZW05 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCHD4Q6ZW05 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PTCHD4Q6ZW05 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms