Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
CNTNAP1P78357 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CNTNAP1P78357 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CNTNAP1P78357 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CNTNAP1P78357 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CNTNAP1P78357 AC026202.3-201ENST00000600805 1127 ntBASIC30.04■■■□□ 2.4
CNTNAP1P78357 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CNTNAP1P78357 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.04■■■□□ 2.4
CNTNAP1P78357 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.04■■■□□ 2.4
CNTNAP1P78357 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CNTNAP1P78357 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CNTNAP1P78357 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.03■■■□□ 2.4
CNTNAP1P78357 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
CNTNAP1P78357 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CNTNAP1P78357 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.02■■■□□ 2.4
CNTNAP1P78357 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CNTNAP1P78357 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CNTNAP1P78357 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
CNTNAP1P78357 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CNTNAP1P78357 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.01■■■□□ 2.4
CNTNAP1P78357 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
CNTNAP1P78357 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CNTNAP1P78357 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
CNTNAP1P78357 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
CNTNAP1P78357 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CNTNAP1P78357 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CNTNAP1P78357 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30■■■□□ 2.39
CNTNAP1P78357 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CNTNAP1P78357 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CNTNAP1P78357 AC139795.1-202ENST00000500444 432 ntBASIC30■■■□□ 2.39
CNTNAP1P78357 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
CNTNAP1P78357 PVT1_1.1-201ENST00000615125 194 ntBASIC29.99■■■□□ 2.39
CNTNAP1P78357 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CNTNAP1P78357 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.98■■■□□ 2.39
CNTNAP1P78357 MIR638-201ENST00000385237 100 ntBASIC29.97■■■□□ 2.39
CNTNAP1P78357 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CNTNAP1P78357 MIR4508-201ENST00000584178 70 ntBASIC29.97■■■□□ 2.39
CNTNAP1P78357 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CNTNAP1P78357 SPCS2P3-201ENST00000500401 656 ntBASIC29.96■■■□□ 2.39
CNTNAP1P78357 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CNTNAP1P78357 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
CNTNAP1P78357 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CNTNAP1P78357 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
CNTNAP1P78357 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
CNTNAP1P78357 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CNTNAP1P78357 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
CNTNAP1P78357 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CNTNAP1P78357 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
CNTNAP1P78357 MIR6765-201ENST00000614092 87 ntBASIC29.92■■■□□ 2.38
CNTNAP1P78357 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.92■■■□□ 2.38
CNTNAP1P78357 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CNTNAP1P78357 AL359258.2-201ENST00000564063 1566 ntBASIC29.92■■■□□ 2.38
CNTNAP1P78357 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CNTNAP1P78357 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.91■■■□□ 2.38
CNTNAP1P78357 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.91■■■□□ 2.38
CNTNAP1P78357 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.91■■■□□ 2.38
CNTNAP1P78357 SMPD5-203ENST00000639008 1464 ntBASIC29.91■■■□□ 2.38
CNTNAP1P78357 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.91■■■□□ 2.38
CNTNAP1P78357 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CNTNAP1P78357 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.91■■■□□ 2.38
CNTNAP1P78357 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CNTNAP1P78357 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.91■■■□□ 2.38
CNTNAP1P78357 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CNTNAP1P78357 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CNTNAP1P78357 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CNTNAP1P78357 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
CNTNAP1P78357 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CNTNAP1P78357 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.9■■■□□ 2.38
CNTNAP1P78357 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
CNTNAP1P78357 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
CNTNAP1P78357 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.89■■■□□ 2.38
CNTNAP1P78357 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
CNTNAP1P78357 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.37
CNTNAP1P78357 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CNTNAP1P78357 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CNTNAP1P78357 AL031848.2-201ENST00000607670 837 ntBASIC29.88■■■□□ 2.37
CNTNAP1P78357 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
CNTNAP1P78357 AC103724.3-201ENST00000564481 992 ntBASIC29.87■■■□□ 2.37
CNTNAP1P78357 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.86■■■□□ 2.37
CNTNAP1P78357 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CNTNAP1P78357 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.85■■■□□ 2.37
CNTNAP1P78357 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CNTNAP1P78357 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.85■■■□□ 2.37
CNTNAP1P78357 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CNTNAP1P78357 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CNTNAP1P78357 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.84■■■□□ 2.37
CNTNAP1P78357 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.84■■■□□ 2.37
CNTNAP1P78357 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.84■■■□□ 2.37
CNTNAP1P78357 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.84■■■□□ 2.37
CNTNAP1P78357 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CNTNAP1P78357 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CNTNAP1P78357 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CNTNAP1P78357 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.83■■■□□ 2.37
CNTNAP1P78357 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.83■■■□□ 2.37
CNTNAP1P78357 AL139393.2-201ENST00000608721 2025 ntBASIC29.83■■■□□ 2.37
CNTNAP1P78357 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CNTNAP1P78357 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.81■■■□□ 2.36
CNTNAP1P78357 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.81■■■□□ 2.36
CNTNAP1P78357 RAP2CP1-202ENST00000605179 643 ntBASIC29.8■■■□□ 2.36
CNTNAP1P78357 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms