Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5BP61020 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5BP61020 LINC01003-201ENST00000564834 1764 ntBASIC19.47■□□□□ 0.71
RAB5BP61020 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5BP61020 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5BP61020 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB5BP61020 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB5BP61020 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB5BP61020 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5BP61020 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5BP61020 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5BP61020 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5BP61020 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5BP61020 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5BP61020 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB5BP61020 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5BP61020 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB5BP61020 ERN1-208ENST00000606895 2068 ntBASIC19.44■□□□□ 0.7
RAB5BP61020 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5BP61020 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5BP61020 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5BP61020 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.43■□□□□ 0.7
RAB5BP61020 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5BP61020 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB5BP61020 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5BP61020 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5BP61020 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5BP61020 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5BP61020 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5BP61020 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5BP61020 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB5BP61020 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB5BP61020 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB5BP61020 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB5BP61020 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB5BP61020 DUSP8P4-201ENST00000399538 1761 ntBASIC19.4■□□□□ 0.7
RAB5BP61020 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB5BP61020 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB5BP61020 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB5BP61020 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB5BP61020 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.39■□□□□ 0.7
RAB5BP61020 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5BP61020 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5BP61020 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5BP61020 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5BP61020 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB5BP61020 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB5BP61020 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB5BP61020 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5BP61020 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5BP61020 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5BP61020 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB5BP61020 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5BP61020 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB5BP61020 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAB5BP61020 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB5BP61020 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB5BP61020 AL024507.2-201ENST00000606070 2574 ntBASIC19.37■□□□□ 0.69
RAB5BP61020 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5BP61020 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
RAB5BP61020 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5BP61020 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5BP61020 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB5BP61020 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB5BP61020 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5BP61020 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5BP61020 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB5BP61020 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB5BP61020 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB5BP61020 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB5BP61020 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB5BP61020 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB5BP61020 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
RAB5BP61020 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5BP61020 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5BP61020 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5BP61020 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB5BP61020 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB5BP61020 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RAB5BP61020 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB5BP61020 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB5BP61020 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB5BP61020 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB5BP61020 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB5BP61020 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB5BP61020 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB5BP61020 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB5BP61020 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms