Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAA4P35542 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.09■□□□□ 0.81
SAA4P35542 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SAA4P35542 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.08■□□□□ 0.81
SAA4P35542 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.08■□□□□ 0.81
SAA4P35542 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SAA4P35542 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SAA4P35542 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SAA4P35542 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SAA4P35542 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA4P35542 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SAA4P35542 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA4P35542 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.07■□□□□ 0.8
SAA4P35542 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SAA4P35542 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA4P35542 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAA4P35542 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.06■□□□□ 0.8
SAA4P35542 SMPD5-203ENST00000639008 1464 ntBASIC20.06■□□□□ 0.8
SAA4P35542 AC142086.6-201ENST00000621154 1765 ntBASIC20.06■□□□□ 0.8
SAA4P35542 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAA4P35542 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.06■□□□□ 0.8
SAA4P35542 NTF6A-201ENST00000591175 560 ntBASIC20.06■□□□□ 0.8
SAA4P35542 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAA4P35542 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAA4P35542 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAA4P35542 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAA4P35542 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAA4P35542 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SAA4P35542 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.05■□□□□ 0.8
SAA4P35542 AC007029.1-201ENST00000604183 313 ntBASIC20.05■□□□□ 0.8
SAA4P35542 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
SAA4P35542 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SAA4P35542 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SAA4P35542 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.04■□□□□ 0.8
SAA4P35542 BX255925.1-201ENST00000566954 1854 ntBASIC20.04■□□□□ 0.8
SAA4P35542 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAA4P35542 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.03■□□□□ 0.8
SAA4P35542 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.03■□□□□ 0.8
SAA4P35542 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAA4P35542 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.03■□□□□ 0.8
SAA4P35542 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.03■□□□□ 0.8
SAA4P35542 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA4P35542 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAA4P35542 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAA4P35542 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SAA4P35542 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SAA4P35542 U85056.1-201ENST00000616429 682 ntBASIC20.02■□□□□ 0.8
SAA4P35542 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.02■□□□□ 0.8
SAA4P35542 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA4P35542 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.01■□□□□ 0.79
SAA4P35542 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.01■□□□□ 0.79
SAA4P35542 AC025884.2-201ENST00000553429 711 ntBASIC20.01■□□□□ 0.79
SAA4P35542 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SAA4P35542 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SAA4P35542 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA4P35542 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.01■□□□□ 0.79
SAA4P35542 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAA4P35542 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SAA4P35542 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
SAA4P35542 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20■□□□□ 0.79
SAA4P35542 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA4P35542 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA4P35542 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20■□□□□ 0.79
SAA4P35542 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAA4P35542 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SAA4P35542 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA4P35542 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAA4P35542 AL359504.2-201ENST00000605506 1601 ntBASIC19.99■□□□□ 0.79
SAA4P35542 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAA4P35542 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAA4P35542 AL449106.1-201ENST00000608517 1980 ntBASIC19.99■□□□□ 0.79
SAA4P35542 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.99■□□□□ 0.79
SAA4P35542 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SAA4P35542 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SAA4P35542 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SAA4P35542 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SAA4P35542 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SAA4P35542 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SAA4P35542 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SAA4P35542 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SAA4P35542 RP9P-202ENST00000450133 1212 ntBASIC19.96■□□□□ 0.79
SAA4P35542 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.96■□□□□ 0.79
SAA4P35542 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.96■□□□□ 0.79
SAA4P35542 MIR3960-201ENST00000583311 91 ntBASIC19.96■□□□□ 0.79
SAA4P35542 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SAA4P35542 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
SAA4P35542 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SAA4P35542 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.95■□□□□ 0.78
SAA4P35542 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA4P35542 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA4P35542 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.94■□□□□ 0.78
SAA4P35542 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SAA4P35542 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA4P35542 AC012354.3-201ENST00000623734 483 ntBASIC19.94■□□□□ 0.78
SAA4P35542 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA4P35542 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SAA4P35542 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SAA4P35542 AC009831.1-201ENST00000580420 1582 ntBASIC19.93■□□□□ 0.78
SAA4P35542 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.93■□□□□ 0.78
SAA4P35542 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms