Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC131212.1-201ENST00000613771 668 ntBASIC31.08■■■□□ 2.57
COL11A2P13942 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL11A2P13942 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL11A2P13942 MIR4508-201ENST00000584178 70 ntBASIC31.07■■■□□ 2.56
COL11A2P13942 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.07■■■□□ 2.56
COL11A2P13942 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
COL11A2P13942 AC139795.1-202ENST00000500444 432 ntBASIC31.07■■■□□ 2.56
COL11A2P13942 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.07■■■□□ 2.56
COL11A2P13942 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.07■■■□□ 2.56
COL11A2P13942 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.06■■■□□ 2.56
COL11A2P13942 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL11A2P13942 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.06■■■□□ 2.56
COL11A2P13942 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.04■■■□□ 2.56
COL11A2P13942 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL11A2P13942 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL11A2P13942 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL11A2P13942 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 AC103724.3-201ENST00000564481 992 ntBASIC31.04■■■□□ 2.56
COL11A2P13942 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL11A2P13942 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
COL11A2P13942 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.03■■■□□ 2.56
COL11A2P13942 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
COL11A2P13942 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
COL11A2P13942 MIR3960-201ENST00000583311 91 ntBASIC31.01■■■□□ 2.56
COL11A2P13942 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.01■■■□□ 2.56
COL11A2P13942 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.56
COL11A2P13942 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.01■■■□□ 2.55
COL11A2P13942 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL11A2P13942 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31■■■□□ 2.55
COL11A2P13942 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.99■■■□□ 2.55
COL11A2P13942 BHLHE23-202ENST00000612929 1109 ntBASIC30.99■■■□□ 2.55
COL11A2P13942 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL11A2P13942 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL11A2P13942 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL11A2P13942 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
COL11A2P13942 AC074183.2-201ENST00000623112 922 ntBASIC30.97■■■□□ 2.55
COL11A2P13942 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.97■■■□□ 2.55
COL11A2P13942 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
COL11A2P13942 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL11A2P13942 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
COL11A2P13942 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.96■■■□□ 2.55
COL11A2P13942 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.96■■■□□ 2.55
COL11A2P13942 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL11A2P13942 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL11A2P13942 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.95■■■□□ 2.55
COL11A2P13942 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL11A2P13942 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.94■■■□□ 2.54
COL11A2P13942 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL11A2P13942 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
COL11A2P13942 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.93■■■□□ 2.54
COL11A2P13942 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
COL11A2P13942 THA1P-201ENST00000590384 1145 ntBASIC30.93■■■□□ 2.54
COL11A2P13942 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.93■■■□□ 2.54
COL11A2P13942 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.92■■■□□ 2.54
COL11A2P13942 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.92■■■□□ 2.54
COL11A2P13942 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
COL11A2P13942 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.92■■■□□ 2.54
COL11A2P13942 YBX1P4-201ENST00000392794 808 ntBASIC30.91■■■□□ 2.54
COL11A2P13942 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
COL11A2P13942 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL11A2P13942 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL11A2P13942 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL11A2P13942 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.9■■■□□ 2.54
COL11A2P13942 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.89■■■□□ 2.54
COL11A2P13942 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
COL11A2P13942 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
COL11A2P13942 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.89■■■□□ 2.54
COL11A2P13942 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.88■■■□□ 2.53
COL11A2P13942 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.87■■■□□ 2.53
COL11A2P13942 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL11A2P13942 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL11A2P13942 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL11A2P13942 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
COL11A2P13942 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL11A2P13942 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.86■■■□□ 2.53
COL11A2P13942 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL11A2P13942 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL11A2P13942 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.84■■■□□ 2.53
COL11A2P13942 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL11A2P13942 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.84■■■□□ 2.53
COL11A2P13942 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
COL11A2P13942 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
COL11A2P13942 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.83■■■□□ 2.53
COL11A2P13942 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.83■■■□□ 2.53
COL11A2P13942 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.82■■■□□ 2.52
COL11A2P13942 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL11A2P13942 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.82■■■□□ 2.52
COL11A2P13942 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL11A2P13942 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms