Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HCN1O60741 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.97■■□□□ 1.27
HCN1O60741 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HCN1O60741 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HCN1O60741 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HCN1O60741 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HCN1O60741 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HCN1O60741 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCN1O60741 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCN1O60741 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCN1O60741 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.96■■□□□ 1.27
HCN1O60741 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
HCN1O60741 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.96■■□□□ 1.27
HCN1O60741 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
HCN1O60741 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HCN1O60741 GPX1-201ENST00000419349 1106 ntBASIC22.95■■□□□ 1.26
HCN1O60741 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.95■■□□□ 1.26
HCN1O60741 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
HCN1O60741 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HCN1O60741 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.94■■□□□ 1.26
HCN1O60741 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HCN1O60741 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.94■■□□□ 1.26
HCN1O60741 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
HCN1O60741 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
HCN1O60741 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HCN1O60741 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HCN1O60741 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.93■■□□□ 1.26
HCN1O60741 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCN1O60741 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCN1O60741 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
HCN1O60741 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCN1O60741 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.92■■□□□ 1.26
HCN1O60741 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
HCN1O60741 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCN1O60741 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HCN1O60741 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HCN1O60741 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HCN1O60741 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
HCN1O60741 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCN1O60741 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HCN1O60741 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HCN1O60741 RNF126P1-201ENST00000567452 1320 ntBASIC22.89■■□□□ 1.26
HCN1O60741 AC022413.1-201ENST00000624602 984 ntBASIC22.89■■□□□ 1.25
HCN1O60741 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HCN1O60741 RARRES2P2-201ENST00000394842 485 ntBASIC22.88■■□□□ 1.25
HCN1O60741 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.88■■□□□ 1.25
HCN1O60741 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HCN1O60741 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
HCN1O60741 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HCN1O60741 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.87■■□□□ 1.25
HCN1O60741 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HCN1O60741 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.87■■□□□ 1.25
HCN1O60741 MIR219A2-201ENST00000608502 1504 ntBASIC22.87■■□□□ 1.25
HCN1O60741 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HCN1O60741 AC018358.1-201ENST00000631079 1402 ntBASIC22.86■■□□□ 1.25
HCN1O60741 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HCN1O60741 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
HCN1O60741 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
HCN1O60741 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.85■■□□□ 1.25
HCN1O60741 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
HCN1O60741 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HCN1O60741 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
HCN1O60741 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
HCN1O60741 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HCN1O60741 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.85■■□□□ 1.25
HCN1O60741 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HCN1O60741 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
HCN1O60741 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HCN1O60741 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
HCN1O60741 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HCN1O60741 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HCN1O60741 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.83■■□□□ 1.25
HCN1O60741 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HCN1O60741 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.83■■□□□ 1.25
HCN1O60741 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HCN1O60741 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
HCN1O60741 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HCN1O60741 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.82■■□□□ 1.24
HCN1O60741 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.82■■□□□ 1.24
HCN1O60741 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HCN1O60741 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
HCN1O60741 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
HCN1O60741 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
HCN1O60741 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HCN1O60741 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.82■■□□□ 1.24
HCN1O60741 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HCN1O60741 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HCN1O60741 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HCN1O60741 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
HCN1O60741 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HCN1O60741 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
HCN1O60741 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.81■■□□□ 1.24
HCN1O60741 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HCN1O60741 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HCN1O60741 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.8■■□□□ 1.24
HCN1O60741 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
HCN1O60741 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
HCN1O60741 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
HCN1O60741 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HCN1O60741 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms