Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 UBE2D3-213ENST00000502690 599 ntTSL 416.64■□□□□ 0.252e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-228ENST00000508974 568 ntTSL 414.03□□□□□ -0.162e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.672e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC10.29□□□□□ -0.762e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-232ENST00000514755 593 ntTSL 410.25□□□□□ -0.772e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-223ENST00000508249 604 ntTSL 49.66□□□□□ -0.862e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.862e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-227ENST00000508818 584 ntTSL 29.64□□□□□ -0.872e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.942e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.162e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-222ENST00000508238 547 ntTSL 47.56□□□□□ -1.22e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.392e-8■□□□□ 10.6
SRSF1Q07955 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.93■□□□□ 0.141e-9■□□□□ 10.6
SRSF1Q07955 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.19□□□□□ -0.461e-9■□□□□ 10.6
SRSF1Q07955 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.611e-9■□□□□ 10.6
SRSF1Q07955 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC10.39□□□□□ -0.751e-9■□□□□ 10.6
SRSF1Q07955 HMGB2-204ENST00000506267 629 ntTSL 321.09■□□□□ 0.977e-13■□□□□ 10.6
SRSF1Q07955 RBBP6-211ENST00000568316 556 ntTSL 522.2■■□□□ 1.142e-8■□□□□ 10.6
SRSF1Q07955 RBBP6-210ENST00000568015 695 ntTSL 314.92□□□□□ -0.022e-8■□□□□ 10.6
SRSF1Q07955 RBBP6-207ENST00000564314 3361 ntTSL 26.23□□□□□ -1.412e-8■□□□□ 10.6
SRSF1Q07955 RBBP6-209ENST00000567686 1138 ntTSL 55.26□□□□□ -1.572e-8■□□□□ 10.6
SRSF1Q07955 ASIC4-205ENST00000474489 2403 ntTSL 1 (best)13.08□□□□□ -0.329e-7■□□□□ 10.6
SRSF1Q07955 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.469e-7■□□□□ 10.6
SRSF1Q07955 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.549e-7■□□□□ 10.6
SRSF1Q07955 LEPROT-202ENST00000475108 492 ntTSL 320.81■□□□□ 0.928e-7■□□□□ 10.6
SRSF1Q07955 LEPROT-205ENST00000497874 377 ntTSL 1 (best)16.89■□□□□ 0.298e-7■□□□□ 10.6
SRSF1Q07955 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.838e-7■□□□□ 10.6
SRSF1Q07955 LEPROT-204ENST00000488747 345 ntTSL 59.54□□□□□ -0.888e-7■□□□□ 10.6
SRSF1Q07955 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.16□□□□□ -1.588e-7■□□□□ 10.6
SRSF1Q07955 LEPROT-203ENST00000484243 549 ntTSL 34.95□□□□□ -1.628e-7■□□□□ 10.6
SRSF1Q07955 FAM178B-205ENST00000494172 592 ntTSL 316.59■□□□□ 0.252e-13■□□□□ 10.6
SRSF1Q07955 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.22e-13■□□□□ 10.6
SRSF1Q07955 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.52e-13■□□□□ 10.6
SRSF1Q07955 FAM178B-202ENST00000470789 722 ntTSL 1 (best)10.58□□□□□ -0.722e-13■□□□□ 10.6
SRSF1Q07955 UBE2G2-205ENST00000478200 637 ntTSL 419.55■□□□□ 0.722e-8■□□□□ 10.6
SRSF1Q07955 UBE2G2-212ENST00000497664 590 ntTSL 419.55■□□□□ 0.722e-8■□□□□ 10.6
SRSF1Q07955 UBE2G2-209ENST00000491513 744 ntTSL 419.09■□□□□ 0.652e-8■□□□□ 10.6
SRSF1Q07955 UBE2G2-211ENST00000497630 933 ntTSL 218.61■□□□□ 0.572e-8■□□□□ 10.6
SRSF1Q07955 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.8■□□□□ 0.122e-8■□□□□ 10.6
SRSF1Q07955 UBE2G2-204ENST00000477954 1034 ntTSL 315.78■□□□□ 0.122e-8■□□□□ 10.6
SRSF1Q07955 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-8■□□□□ 10.6
SRSF1Q07955 PPAN-204ENST00000444703 757 ntTSL 324.29■■□□□ 1.483e-6■□□□□ 10.6
SRSF1Q07955 PPAN-208ENST00000486482 1017 ntTSL 223.28■■□□□ 1.323e-6■□□□□ 10.6
SRSF1Q07955 HGFAC-202ENST00000506132 743 ntTSL 217.11■□□□□ 0.334e-6■□□□□ 10.6
SRSF1Q07955 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.24■□□□□ 0.034e-6■□□□□ 10.6
SRSF1Q07955 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.024e-6■□□□□ 10.6
SRSF1Q07955 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.094e-6■□□□□ 10.6
SRSF1Q07955 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.34□□□□□ -0.114e-6■□□□□ 10.6
SRSF1Q07955 MED24-225ENST00000580885 1963 ntTSL 513.71□□□□□ -0.214e-6■□□□□ 10.6
SRSF1Q07955 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.24□□□□□ -0.294e-6■□□□□ 10.6
SRSF1Q07955 HNRNPH3-207ENST00000480987 752 ntTSL 412.77□□□□□ -0.372e-8■□□□□ 10.6
SRSF1Q07955 MED24-213ENST00000535071 2441 ntTSL 512.41□□□□□ -0.424e-6■□□□□ 10.6
SRSF1Q07955 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.54e-6■□□□□ 10.6
SRSF1Q07955 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.02□□□□□ -0.654e-6■□□□□ 10.6
SRSF1Q07955 PACSIN2-212ENST00000634914 1431 ntTSL 510.68□□□□□ -0.74e-6■□□□□ 10.6
SRSF1Q07955 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.824e-6■□□□□ 10.6
SRSF1Q07955 MED24-214ENST00000535508 3334 ntTSL 29.87□□□□□ -0.834e-6■□□□□ 10.6
SRSF1Q07955 MED24-201ENST00000356271 3446 ntTSL 2 BASIC9.55□□□□□ -0.884e-6■□□□□ 10.6
SRSF1Q07955 MED24-212ENST00000501516 3037 ntTSL 5 BASIC9.19□□□□□ -0.944e-6■□□□□ 10.6
SRSF1Q07955 MED24-203ENST00000394127 3456 ntTSL 2 BASIC9.19□□□□□ -0.944e-6■□□□□ 10.6
SRSF1Q07955 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.984e-6■□□□□ 10.6
SRSF1Q07955 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.68□□□□□ -1.024e-6■□□□□ 10.6
SRSF1Q07955 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC8.4□□□□□ -1.064e-6■□□□□ 10.6
SRSF1Q07955 MED24-219ENST00000578901 728 ntTSL 1 (best)8.34□□□□□ -1.074e-6■□□□□ 10.6
SRSF1Q07955 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.01□□□□□ -1.132e-11■□□□□ 10.6
SRSF1Q07955 HNRNPH3-203ENST00000461310 648 ntTSL 57.7□□□□□ -1.182e-8■□□□□ 10.6
SRSF1Q07955 HNRNPH3-209ENST00000486854 635 ntTSL 26.77□□□□□ -1.332e-8■□□□□ 10.6
SRSF1Q07955 HNRNPH3-204ENST00000467249 566 ntTSL 26.18□□□□□ -1.421e-8■□□□□ 10.6
SRSF1Q07955 EHBP1-206ENST00000422032 669 ntTSL 55.51□□□□□ -1.539e-9■□□□□ 10.6
SRSF1Q07955 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.682e-11■□□□□ 10.6
SRSF1Q07955 EHBP1-218ENST00000491965 584 ntTSL 24.21□□□□□ -1.749e-9■□□□□ 10.6
SRSF1Q07955 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.093e-8■□□□□ 10.6
SRSF1Q07955 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.143e-8■□□□□ 10.6
SRSF1Q07955 NPM1-208ENST00000521672 597 ntTSL 57.28□□□□□ -1.243e-8■□□□□ 10.6
SRSF1Q07955 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.88□□□□□ -1.633e-8■□□□□ 10.6
SRSF1Q07955 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.79□□□□□ -1.643e-8■□□□□ 10.6
SRSF1Q07955 AARS-206ENST00000569790 528 ntTSL 57□□□□□ -1.294e-9■□□□□ 10.6
SRSF1Q07955 HNRNPH1-229ENST00000518548 527 ntTSL 22.81□□□□□ -1.962e-17■□□□□ 10.6
SRSF1Q07955 ENOSF1-221ENST00000585004 1501 ntTSL 210.11□□□□□ -0.792e-6■□□□□ 10.5
SRSF1Q07955 NUP85-219ENST00000582833 453 ntTSL 58.97□□□□□ -0.971e-6■□□□□ 10.5
SRSF1Q07955 NUP85-221ENST00000583548 562 ntTSL 57.07□□□□□ -1.281e-6■□□□□ 10.5
SRSF1Q07955 NUP85-204ENST00000577208 572 ntTSL 46.01□□□□□ -1.451e-6■□□□□ 10.5
SRSF1Q07955 NUP85-222ENST00000583569 553 ntTSL 54.66□□□□□ -1.661e-6■□□□□ 10.5
SRSF1Q07955 MED15-230ENST00000492381 3619 ntTSL 28.33□□□□□ -1.082e-7■□□□□ 10.5
SRSF1Q07955 BAZ2A-210ENST00000549787 2773 ntTSL 1 (best)9.75□□□□□ -0.856e-9■□□□□ 10.5
SRSF1Q07955 CALR-204ENST00000586967 394 ntTSL 212.69□□□□□ -0.381e-40■□□□□ 10.5
SRSF1Q07955 HNRNPC-228ENST00000557033 760 ntTSL 39.27□□□□□ -0.931e-22■□□□□ 10.5
SRSF1Q07955 ANKRD10-210ENST00000494859 705 ntTSL 528.06■■■□□ 2.089e-8■□□□□ 10.5
SRSF1Q07955 GUK1-239ENST00000498115 796 ntTSL 516.36■□□□□ 0.214e-8■□□□□ 10.5
SRSF1Q07955 GUK1-222ENST00000477206 589 ntTSL 216.31■□□□□ 0.24e-8■□□□□ 10.5
SRSF1Q07955 GUK1-216ENST00000464858 633 ntTSL 314.53□□□□□ -0.084e-8■□□□□ 10.5
SRSF1Q07955 STXBP2-213ENST00000599278 295 ntTSL 314.43□□□□□ -0.14e-8■□□□□ 10.5
SRSF1Q07955 GUK1-217ENST00000465025 783 ntTSL 213.95□□□□□ -0.184e-8■□□□□ 10.5
SRSF1Q07955 SEMA4C-203ENST00000449330 839 ntTSL 313.82□□□□□ -0.24e-8■□□□□ 10.5
SRSF1Q07955 GUK1-225ENST00000481341 333 ntTSL 313.68□□□□□ -0.224e-8■□□□□ 10.5
SRSF1Q07955 ANKRD10-203ENST00000460846 535 ntTSL 312.58□□□□□ -0.49e-8■□□□□ 10.5
SRSF1Q07955 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.454e-8■□□□□ 10.5
SRSF1Q07955 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.7□□□□□ -0.74e-8■□□□□ 10.5
SRSF1Q07955 SUN1-229ENST00000475971 4038 ntTSL 1 (best)7.26□□□□□ -1.254e-8■□□□□ 10.5
Retrieved 100 of 14,836 protein–RNA pairs in 186.4 ms