RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
PACSIN2-205ENST00000407585 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
PACSIN2-205ENST00000407585 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
PACSIN2-205ENST00000407585 ZCCHC6Q5VYS8 1495 aaKnown RBP28.87■■■□□ 2.21
PACSIN2-205ENST00000407585 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
PACSIN2-205ENST00000407585 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
PACSIN2-205ENST00000407585 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
PACSIN2-205ENST00000407585 HRCP23327 699 aa28.62■■■□□ 2.17
PACSIN2-205ENST00000407585 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
PACSIN2-205ENST00000407585 PCGF6Q9BYE7 350 aa28.51■■■□□ 2.15
PACSIN2-205ENST00000407585 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
PACSIN2-205ENST00000407585 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
PACSIN2-205ENST00000407585 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
PACSIN2-205ENST00000407585 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
PACSIN2-205ENST00000407585 FAM9AQ8IZU1 332 aaPredicted RBP27.41■■□□□ 1.98
PACSIN2-205ENST00000407585 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
PACSIN2-205ENST00000407585 EHMT2Q96KQ7 1210 aa27.35■■□□□ 1.97
PACSIN2-205ENST00000407585 ABCC9O60706 1549 aa27.31■■□□□ 1.96
PACSIN2-205ENST00000407585 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
PACSIN2-205ENST00000407585 ZEB1P37275 1124 aaPredicted RBP27.22■■□□□ 1.95
PACSIN2-205ENST00000407585 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
PACSIN2-205ENST00000407585 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
PACSIN2-205ENST00000407585 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
PACSIN2-205ENST00000407585 SCAF1Q9H7N4 1312 aaKnown RBP26.71■■□□□ 1.87
PACSIN2-205ENST00000407585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.66■■□□□ 1.86
PACSIN2-205ENST00000407585 CCER1Q8TC90 406 aaPredicted RBP26.62■■□□□ 1.85
PACSIN2-205ENST00000407585 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
PACSIN2-205ENST00000407585 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.85
PACSIN2-205ENST00000407585 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
PACSIN2-205ENST00000407585 WIZO95785 1651 aa26.49■■□□□ 1.83
PACSIN2-205ENST00000407585 NACADO15069 1562 aa26.42■■□□□ 1.82
PACSIN2-205ENST00000407585 ACIN1Q9UKV3 1341 aaKnown RBP26.29■■□□□ 1.8
PACSIN2-205ENST00000407585 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
PACSIN2-205ENST00000407585 DIEXFQ68CQ4 756 aaKnown RBP26.27■■□□□ 1.8
PACSIN2-205ENST00000407585 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
PACSIN2-205ENST00000407585 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
PACSIN2-205ENST00000407585 CCDC88BA6NC98 1476 aa26.14■■□□□ 1.78
PACSIN2-205ENST00000407585 CENPBP07199 599 aaPredicted RBP26.14■■□□□ 1.77
PACSIN2-205ENST00000407585 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
PACSIN2-205ENST00000407585 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
PACSIN2-205ENST00000407585 GTF3C3Q9Y5Q9 886 aa26.1■■□□□ 1.77
PACSIN2-205ENST00000407585 EIF4G1Q04637 1599 aaKnown RBP26.08■■□□□ 1.77
PACSIN2-205ENST00000407585 SOGA1O94964 1423 aa26.05■■□□□ 1.76
PACSIN2-205ENST00000407585 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
PACSIN2-205ENST00000407585 CSRNP3Q8WYN3 585 aa25.99■■□□□ 1.75
PACSIN2-205ENST00000407585 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
PACSIN2-205ENST00000407585 TNIKQ9UKE5 1360 aa25.96■■□□□ 1.75
PACSIN2-205ENST00000407585 ZNF316A6NFI3 1004 aaPredicted RBP25.89■■□□□ 1.74
PACSIN2-205ENST00000407585 YTHDC1Q96MU7 727 aaKnown RBP25.89■■□□□ 1.74
PACSIN2-205ENST00000407585 RUSC2Q8N2Y8 1516 aa25.89■■□□□ 1.73
PACSIN2-205ENST00000407585 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
PACSIN2-205ENST00000407585 HNRNPUL2Q1KMD3 747 aaKnown RBP25.85■■□□□ 1.73
PACSIN2-205ENST00000407585 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
PACSIN2-205ENST00000407585 EEA1Q15075 1411 aa25.79■■□□□ 1.72
PACSIN2-205ENST00000407585 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
PACSIN2-205ENST00000407585 RANGAP1P46060 587 aaPredicted RBP25.72■■□□□ 1.71
PACSIN2-205ENST00000407585 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
PACSIN2-205ENST00000407585 APLP2Q06481 763 aa25.65■■□□□ 1.7
PACSIN2-205ENST00000407585 MIER1Q8N108 512 aa25.65■■□□□ 1.7
PACSIN2-205ENST00000407585 CLIP1P30622 1438 aa25.56■■□□□ 1.68
PACSIN2-205ENST00000407585 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
PACSIN2-205ENST00000407585 UNC13AQ9UPW8 1703 aa25.47■■□□□ 1.67
PACSIN2-205ENST00000407585 VPS8Q8N3P4 1428 aa25.42■■□□□ 1.66
PACSIN2-205ENST00000407585 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
PACSIN2-205ENST00000407585 RAPGEF2Q9Y4G8 1499 aa25.35■■□□□ 1.65
PACSIN2-205ENST00000407585 KIF21BO75037 1637 aa25.34■■□□□ 1.65
PACSIN2-205ENST00000407585 MYT1Q01538 1121 aa25.31■■□□□ 1.64
PACSIN2-205ENST00000407585 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
PACSIN2-205ENST00000407585 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
PACSIN2-205ENST00000407585 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
PACSIN2-205ENST00000407585 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
PACSIN2-205ENST00000407585 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
PACSIN2-205ENST00000407585 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
PACSIN2-205ENST00000407585 ITGAEP38570 1179 aa25.09■■□□□ 1.61
PACSIN2-205ENST00000407585 CLSPNQ9HAW4 1339 aa25.06■■□□□ 1.6
PACSIN2-205ENST00000407585 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
PACSIN2-205ENST00000407585 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
PACSIN2-205ENST00000407585 SUPT16HQ9Y5B9 1047 aaKnown RBP24.95■■□□□ 1.58
PACSIN2-205ENST00000407585 PRXQ9BXM0 1461 aa24.91■■□□□ 1.58
PACSIN2-205ENST00000407585 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
PACSIN2-205ENST00000407585 CCNB3Q8WWL7 1395 aa24.84■■□□□ 1.57
PACSIN2-205ENST00000407585 RRBP1Q9P2E9 1410 aaKnown RBP24.82■■□□□ 1.56
PACSIN2-205ENST00000407585 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
PACSIN2-205ENST00000407585 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
PACSIN2-205ENST00000407585 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
PACSIN2-205ENST00000407585 CUX1P39880 1505 aa24.72■■□□□ 1.55
PACSIN2-205ENST00000407585 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
PACSIN2-205ENST00000407585 ARHGAP35Q9NRY4 1499 aa24.7■■□□□ 1.54
PACSIN2-205ENST00000407585 BCANQ96GW7 911 aa24.68■■□□□ 1.54
PACSIN2-205ENST00000407585 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
PACSIN2-205ENST00000407585 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
PACSIN2-205ENST00000407585 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
PACSIN2-205ENST00000407585 TSHZ2Q9NRE2 1034 aa24.64■■□□□ 1.54
PACSIN2-205ENST00000407585 CUX2O14529 1486 aa24.63■■□□□ 1.53
PACSIN2-205ENST00000407585 SIN3AQ96ST3 1273 aa24.63■■□□□ 1.53
PACSIN2-205ENST00000407585 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
PACSIN2-205ENST00000407585 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
PACSIN2-205ENST00000407585 SETD5Q9C0A6 1442 aa24.55■■□□□ 1.52
PACSIN2-205ENST00000407585 FKBP8Q14318 412 aa24.54■■□□□ 1.52
PACSIN2-205ENST00000407585 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms