RNA–Protein interactions for RNA: ENST00000337959.8

PACSIN2-202, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 5 BASIC

Gene PACSIN2, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-202ENST00000337959 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
PACSIN2-202ENST00000337959 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
PACSIN2-202ENST00000337959 ABCC9O60706 1549 aa25.36■■□□□ 1.65
PACSIN2-202ENST00000337959 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
PACSIN2-202ENST00000337959 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
PACSIN2-202ENST00000337959 NACADO15069 1562 aa24.15■■□□□ 1.46
PACSIN2-202ENST00000337959 ZCCHC6Q5VYS8 1495 aaKnown RBP23.89■■□□□ 1.42
PACSIN2-202ENST00000337959 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
PACSIN2-202ENST00000337959 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
PACSIN2-202ENST00000337959 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
PACSIN2-202ENST00000337959 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
PACSIN2-202ENST00000337959 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
PACSIN2-202ENST00000337959 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
PACSIN2-202ENST00000337959 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
PACSIN2-202ENST00000337959 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
PACSIN2-202ENST00000337959 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
PACSIN2-202ENST00000337959 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
PACSIN2-202ENST00000337959 CECR2Q9BXF3 1484 aa22.78■■□□□ 1.24
PACSIN2-202ENST00000337959 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
PACSIN2-202ENST00000337959 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
PACSIN2-202ENST00000337959 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
PACSIN2-202ENST00000337959 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
PACSIN2-202ENST00000337959 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
PACSIN2-202ENST00000337959 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
PACSIN2-202ENST00000337959 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
PACSIN2-202ENST00000337959 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
PACSIN2-202ENST00000337959 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
PACSIN2-202ENST00000337959 HRCP23327 699 aa22.06■■□□□ 1.12
PACSIN2-202ENST00000337959 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
PACSIN2-202ENST00000337959 WIZO95785 1651 aa21.95■■□□□ 1.1
PACSIN2-202ENST00000337959 NESP48681 1621 aa21.89■■□□□ 1.09
PACSIN2-202ENST00000337959 PPARGC1BQ86YN6 1023 aaKnown RBP21.86■■□□□ 1.09
PACSIN2-202ENST00000337959 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
PACSIN2-202ENST00000337959 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
PACSIN2-202ENST00000337959 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
PACSIN2-202ENST00000337959 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
PACSIN2-202ENST00000337959 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
PACSIN2-202ENST00000337959 CUX2O14529 1486 aa21.66■■□□□ 1.06
PACSIN2-202ENST00000337959 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
PACSIN2-202ENST00000337959 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
PACSIN2-202ENST00000337959 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
PACSIN2-202ENST00000337959 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
PACSIN2-202ENST00000337959 THOC2Q8NI27 1593 aaKnown RBP21.58■■□□□ 1.05
PACSIN2-202ENST00000337959 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
PACSIN2-202ENST00000337959 CFTRP13569 1480 aa21.46■■□□□ 1.03
PACSIN2-202ENST00000337959 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
PACSIN2-202ENST00000337959 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
PACSIN2-202ENST00000337959 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
PACSIN2-202ENST00000337959 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.02
PACSIN2-202ENST00000337959 WDR62O43379 1518 aa21.35■■□□□ 1.01
PACSIN2-202ENST00000337959 PRDM2Q13029 1718 aa21.32■■□□□ 1
PACSIN2-202ENST00000337959 DNAJC5Q9H3Z4 198 aa21.28■■□□□ 1
PACSIN2-202ENST00000337959 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
PACSIN2-202ENST00000337959 MYT1Q01538 1121 aa21.13■□□□□ 0.97
PACSIN2-202ENST00000337959 LOC105371045A0A1W2PR82 267 aa21.1■□□□□ 0.97
PACSIN2-202ENST00000337959 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
PACSIN2-202ENST00000337959 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
PACSIN2-202ENST00000337959 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
PACSIN2-202ENST00000337959 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
PACSIN2-202ENST00000337959 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
PACSIN2-202ENST00000337959 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
PACSIN2-202ENST00000337959 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
PACSIN2-202ENST00000337959 POLA1P09884 1462 aaPredicted RBP20.85■□□□□ 0.93
PACSIN2-202ENST00000337959 TARBP1Q13395 1621 aaKnown RBP20.84■□□□□ 0.93
PACSIN2-202ENST00000337959 EIF4G3O43432 1585 aaKnown RBP20.82■□□□□ 0.92
PACSIN2-202ENST00000337959 CUX1P39880 1505 aa20.81■□□□□ 0.92
PACSIN2-202ENST00000337959 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
PACSIN2-202ENST00000337959 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
PACSIN2-202ENST00000337959 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.914e-9■■■□□ 15.2
PACSIN2-202ENST00000337959 SOGA1O94964 1423 aa20.75■□□□□ 0.91
PACSIN2-202ENST00000337959 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
PACSIN2-202ENST00000337959 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
PACSIN2-202ENST00000337959 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
PACSIN2-202ENST00000337959 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
PACSIN2-202ENST00000337959 CHD1O14646 1710 aa20.62■□□□□ 0.89
PACSIN2-202ENST00000337959 EHMT2Q96KQ7 1210 aa20.59■□□□□ 0.89
PACSIN2-202ENST00000337959 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
PACSIN2-202ENST00000337959 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
PACSIN2-202ENST00000337959 FBLN2P98095 1184 aa20.57■□□□□ 0.88
PACSIN2-202ENST00000337959 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
PACSIN2-202ENST00000337959 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
PACSIN2-202ENST00000337959 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
PACSIN2-202ENST00000337959 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
PACSIN2-202ENST00000337959 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
PACSIN2-202ENST00000337959 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
PACSIN2-202ENST00000337959 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
PACSIN2-202ENST00000337959 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
PACSIN2-202ENST00000337959 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
PACSIN2-202ENST00000337959 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
PACSIN2-202ENST00000337959 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
PACSIN2-202ENST00000337959 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
PACSIN2-202ENST00000337959 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
PACSIN2-202ENST00000337959 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
PACSIN2-202ENST00000337959 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
PACSIN2-202ENST00000337959 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
PACSIN2-202ENST00000337959 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
PACSIN2-202ENST00000337959 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
PACSIN2-202ENST00000337959 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
PACSIN2-202ENST00000337959 GTF3C3Q9Y5Q9 886 aa20.38■□□□□ 0.85
PACSIN2-202ENST00000337959 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms