RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
NUP85-204ENST00000577208 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
NUP85-204ENST00000577208 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
NUP85-204ENST00000577208 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
NUP85-204ENST00000577208 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
NUP85-204ENST00000577208 FOXD1Q16676 465 aa20.78■□□□□ 0.92
NUP85-204ENST00000577208 ADRA2BP18089 450 aa20.45■□□□□ 0.86
NUP85-204ENST00000577208 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
NUP85-204ENST00000577208 PIAS4Q8N2W9 510 aaPredicted RBP19.75■□□□□ 0.75
NUP85-204ENST00000577208 KCNA4P22459 653 aa19.27■□□□□ 0.68
NUP85-204ENST00000577208 PPP4R3CPQ6ZMV5 832 aa19.13■□□□□ 0.65
NUP85-204ENST00000577208 MSH5O43196 834 aa18.9■□□□□ 0.62
NUP85-204ENST00000577208 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
NUP85-204ENST00000577208 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
NUP85-204ENST00000577208 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
NUP85-204ENST00000577208 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
NUP85-204ENST00000577208 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
NUP85-204ENST00000577208 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
NUP85-204ENST00000577208 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
NUP85-204ENST00000577208 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
NUP85-204ENST00000577208 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
NUP85-204ENST00000577208 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
NUP85-204ENST00000577208 ZBTB22O15209 634 aa17.73■□□□□ 0.43
NUP85-204ENST00000577208 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
NUP85-204ENST00000577208 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
NUP85-204ENST00000577208 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
NUP85-204ENST00000577208 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
NUP85-204ENST00000577208 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
NUP85-204ENST00000577208 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
NUP85-204ENST00000577208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
NUP85-204ENST00000577208 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
NUP85-204ENST00000577208 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
NUP85-204ENST00000577208 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
NUP85-204ENST00000577208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
NUP85-204ENST00000577208 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
NUP85-204ENST00000577208 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
NUP85-204ENST00000577208 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
NUP85-204ENST00000577208 APLP2Q06481 763 aa16.32■□□□□ 0.2
NUP85-204ENST00000577208 FKBP8Q14318 412 aa16.31■□□□□ 0.2
NUP85-204ENST00000577208 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
NUP85-204ENST00000577208 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
NUP85-204ENST00000577208 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
NUP85-204ENST00000577208 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
NUP85-204ENST00000577208 CAPN15O75808 1086 aa16.15■□□□□ 0.18
NUP85-204ENST00000577208 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
NUP85-204ENST00000577208 POLA2Q14181 598 aa15.98■□□□□ 0.15
NUP85-204ENST00000577208 ABCB7O75027 752 aa15.93■□□□□ 0.14
NUP85-204ENST00000577208 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
NUP85-204ENST00000577208 FBLN2P98095 1184 aa15.85■□□□□ 0.13
NUP85-204ENST00000577208 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
NUP85-204ENST00000577208 DSG3P32926 999 aa15.66■□□□□ 0.1
NUP85-204ENST00000577208 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
NUP85-204ENST00000577208 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
NUP85-204ENST00000577208 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
NUP85-204ENST00000577208 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
NUP85-204ENST00000577208 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
NUP85-204ENST00000577208 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
NUP85-204ENST00000577208 PROM2Q8N271 834 aa15.43■□□□□ 0.06
NUP85-204ENST00000577208 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
NUP85-204ENST00000577208 VASPP50552 380 aaPredicted RBP15.31■□□□□ 0.04
NUP85-204ENST00000577208 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
NUP85-204ENST00000577208 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
NUP85-204ENST00000577208 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
NUP85-204ENST00000577208 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
NUP85-204ENST00000577208 SSUH2Q9Y2M2 353 aa15.2■□□□□ 0.02
NUP85-204ENST00000577208 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
NUP85-204ENST00000577208 KLHL34Q8N239 644 aa15.03■□□□□ -0
NUP85-204ENST00000577208 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
NUP85-204ENST00000577208 PLCD3Q8N3E9 789 aa14.99□□□□□ -0.01
NUP85-204ENST00000577208 MIER1Q8N108 512 aa14.95□□□□□ -0.02
NUP85-204ENST00000577208 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
NUP85-204ENST00000577208 SPOCK2Q92563 424 aa14.87□□□□□ -0.03
NUP85-204ENST00000577208 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
NUP85-204ENST00000577208 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
NUP85-204ENST00000577208 PKD2Q13563 968 aa14.8□□□□□ -0.04
NUP85-204ENST00000577208 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
NUP85-204ENST00000577208 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
NUP85-204ENST00000577208 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
NUP85-204ENST00000577208 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
NUP85-204ENST00000577208 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
NUP85-204ENST00000577208 ECM2O94769 699 aaPredicted RBP14.69□□□□□ -0.06
NUP85-204ENST00000577208 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
NUP85-204ENST00000577208 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
NUP85-204ENST00000577208 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
NUP85-204ENST00000577208 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
NUP85-204ENST00000577208 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
NUP85-204ENST00000577208 RGL2O15211 777 aa14.52□□□□□ -0.09
NUP85-204ENST00000577208 DCAF8Q5TAQ9 597 aa14.45□□□□□ -0.1
NUP85-204ENST00000577208 NUBP1P53384 320 aa14.44□□□□□ -0.1
NUP85-204ENST00000577208 PLCB2Q00722 1185 aa14.44□□□□□ -0.1
NUP85-204ENST00000577208 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
NUP85-204ENST00000577208 MNX1P50219 401 aaPredicted RBP14.39□□□□□ -0.11
NUP85-204ENST00000577208 GSE1Q14687 1217 aa14.39□□□□□ -0.11
NUP85-204ENST00000577208 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
NUP85-204ENST00000577208 HAP1P54257 671 aaPredicted RBP14.36□□□□□ -0.11
NUP85-204ENST00000577208 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
NUP85-204ENST00000577208 FAM212AQ96EL1 285 aa14.34□□□□□ -0.11
NUP85-204ENST00000577208 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
NUP85-204ENST00000577208 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
NUP85-204ENST00000577208 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms