RNA–Protein interactions for RNA: ENST00000347842.7

ASIC4-201, Transcript of acid sensing ion channel subunit family member 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ASIC4, Length 2,684 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC4-201ENST00000347842 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
ASIC4-201ENST00000347842 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
ASIC4-201ENST00000347842 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
ASIC4-201ENST00000347842 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
ASIC4-201ENST00000347842 ABCC9O60706 1549 aa27.82■■■□□ 2.04
ASIC4-201ENST00000347842 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
ASIC4-201ENST00000347842 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
ASIC4-201ENST00000347842 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
ASIC4-201ENST00000347842 NACADO15069 1562 aa27.32■■□□□ 1.96
ASIC4-201ENST00000347842 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
ASIC4-201ENST00000347842 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
ASIC4-201ENST00000347842 SCRIBQ14160 1630 aa26.86■■□□□ 1.89
ASIC4-201ENST00000347842 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
ASIC4-201ENST00000347842 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.81
ASIC4-201ENST00000347842 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
ASIC4-201ENST00000347842 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
ASIC4-201ENST00000347842 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
ASIC4-201ENST00000347842 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
ASIC4-201ENST00000347842 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
ASIC4-201ENST00000347842 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
ASIC4-201ENST00000347842 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
ASIC4-201ENST00000347842 WIZO95785 1651 aa25.69■■□□□ 1.7
ASIC4-201ENST00000347842 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
ASIC4-201ENST00000347842 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
ASIC4-201ENST00000347842 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
ASIC4-201ENST00000347842 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
ASIC4-201ENST00000347842 TOP2AP11388 1531 aaKnown RBP25.33■■□□□ 1.65
ASIC4-201ENST00000347842 CC2D2AQ9P2K1 1620 aa25.24■■□□□ 1.63
ASIC4-201ENST00000347842 NCAPD3P42695 1498 aa25.2■■□□□ 1.63
ASIC4-201ENST00000347842 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
ASIC4-201ENST00000347842 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
ASIC4-201ENST00000347842 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
ASIC4-201ENST00000347842 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
ASIC4-201ENST00000347842 HRCP23327 699 aa25.15■■□□□ 1.62
ASIC4-201ENST00000347842 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
ASIC4-201ENST00000347842 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
ASIC4-201ENST00000347842 PELP1Q8IZL8 1130 aaKnown RBP24.91■■□□□ 1.58
ASIC4-201ENST00000347842 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
ASIC4-201ENST00000347842 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
ASIC4-201ENST00000347842 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
ASIC4-201ENST00000347842 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
ASIC4-201ENST00000347842 CFTRP13569 1480 aa24.57■■□□□ 1.52
ASIC4-201ENST00000347842 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
ASIC4-201ENST00000347842 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
ASIC4-201ENST00000347842 SOGA1O94964 1423 aa24.47■■□□□ 1.51
ASIC4-201ENST00000347842 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
ASIC4-201ENST00000347842 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
ASIC4-201ENST00000347842 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
ASIC4-201ENST00000347842 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
ASIC4-201ENST00000347842 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
ASIC4-201ENST00000347842 NESP48681 1621 aa24.39■■□□□ 1.5
ASIC4-201ENST00000347842 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
ASIC4-201ENST00000347842 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
ASIC4-201ENST00000347842 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
ASIC4-201ENST00000347842 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
ASIC4-201ENST00000347842 CUX1P39880 1505 aa24.16■■□□□ 1.46
ASIC4-201ENST00000347842 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
ASIC4-201ENST00000347842 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
ASIC4-201ENST00000347842 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
ASIC4-201ENST00000347842 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
ASIC4-201ENST00000347842 EEA1Q15075 1411 aa24.09■■□□□ 1.45
ASIC4-201ENST00000347842 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
ASIC4-201ENST00000347842 MYT1Q01538 1121 aa24.05■■□□□ 1.44
ASIC4-201ENST00000347842 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.43
ASIC4-201ENST00000347842 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
ASIC4-201ENST00000347842 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
ASIC4-201ENST00000347842 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
ASIC4-201ENST00000347842 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
ASIC4-201ENST00000347842 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
ASIC4-201ENST00000347842 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
ASIC4-201ENST00000347842 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
ASIC4-201ENST00000347842 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
ASIC4-201ENST00000347842 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.41
ASIC4-201ENST00000347842 KIF21BO75037 1637 aa23.86■■□□□ 1.41
ASIC4-201ENST00000347842 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
ASIC4-201ENST00000347842 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
ASIC4-201ENST00000347842 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.41
ASIC4-201ENST00000347842 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
ASIC4-201ENST00000347842 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
ASIC4-201ENST00000347842 WDR62O43379 1518 aa23.82■■□□□ 1.4
ASIC4-201ENST00000347842 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
ASIC4-201ENST00000347842 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
ASIC4-201ENST00000347842 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
ASIC4-201ENST00000347842 CUX2O14529 1486 aa23.72■■□□□ 1.39
ASIC4-201ENST00000347842 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
ASIC4-201ENST00000347842 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
ASIC4-201ENST00000347842 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
ASIC4-201ENST00000347842 CLIP1P30622 1438 aa23.68■■□□□ 1.38
ASIC4-201ENST00000347842 IGF1RP08069 1367 aa23.61■■□□□ 1.37
ASIC4-201ENST00000347842 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
ASIC4-201ENST00000347842 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.37
ASIC4-201ENST00000347842 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
ASIC4-201ENST00000347842 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
ASIC4-201ENST00000347842 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
ASIC4-201ENST00000347842 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
ASIC4-201ENST00000347842 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
ASIC4-201ENST00000347842 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
ASIC4-201ENST00000347842 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
ASIC4-201ENST00000347842 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
ASIC4-201ENST00000347842 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.341e-9■■■■■ 86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms