RNA–Protein interactions for RNA: ENST00000347842.7

ASIC4-201, Transcript of acid sensing ion channel subunit family member 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ASIC4, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC4-201ENST00000347842 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
ASIC4-201ENST00000347842 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
ASIC4-201ENST00000347842 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
ASIC4-201ENST00000347842 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
ASIC4-201ENST00000347842 ABCC9O60706 1549 aa27.82■■■□□ 2.04
ASIC4-201ENST00000347842 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
ASIC4-201ENST00000347842 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
ASIC4-201ENST00000347842 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
ASIC4-201ENST00000347842 NACADO15069 1562 aa27.32■■□□□ 1.96
ASIC4-201ENST00000347842 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
ASIC4-201ENST00000347842 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
ASIC4-201ENST00000347842 SCRIBQ14160 1630 aa26.86■■□□□ 1.89
ASIC4-201ENST00000347842 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
ASIC4-201ENST00000347842 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.81
ASIC4-201ENST00000347842 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
ASIC4-201ENST00000347842 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
ASIC4-201ENST00000347842 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
ASIC4-201ENST00000347842 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
ASIC4-201ENST00000347842 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
ASIC4-201ENST00000347842 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
ASIC4-201ENST00000347842 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
ASIC4-201ENST00000347842 WIZO95785 1651 aa25.69■■□□□ 1.7
ASIC4-201ENST00000347842 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
ASIC4-201ENST00000347842 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
ASIC4-201ENST00000347842 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
ASIC4-201ENST00000347842 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
ASIC4-201ENST00000347842 TOP2AP11388 1531 aaKnown RBP25.33■■□□□ 1.65
ASIC4-201ENST00000347842 CC2D2AQ9P2K1 1620 aa25.24■■□□□ 1.63
ASIC4-201ENST00000347842 NCAPD3P42695 1498 aa25.2■■□□□ 1.63
ASIC4-201ENST00000347842 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
ASIC4-201ENST00000347842 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
ASIC4-201ENST00000347842 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
ASIC4-201ENST00000347842 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
ASIC4-201ENST00000347842 HRCP23327 699 aa25.15■■□□□ 1.62
ASIC4-201ENST00000347842 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
ASIC4-201ENST00000347842 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
ASIC4-201ENST00000347842 PELP1Q8IZL8 1130 aaKnown RBP24.91■■□□□ 1.58
ASIC4-201ENST00000347842 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
ASIC4-201ENST00000347842 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
ASIC4-201ENST00000347842 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
ASIC4-201ENST00000347842 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
ASIC4-201ENST00000347842 CFTRP13569 1480 aa24.57■■□□□ 1.52
ASIC4-201ENST00000347842 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
ASIC4-201ENST00000347842 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
ASIC4-201ENST00000347842 SOGA1O94964 1423 aa24.47■■□□□ 1.51
ASIC4-201ENST00000347842 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
ASIC4-201ENST00000347842 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
ASIC4-201ENST00000347842 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
ASIC4-201ENST00000347842 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
ASIC4-201ENST00000347842 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
ASIC4-201ENST00000347842 NESP48681 1621 aa24.39■■□□□ 1.5
ASIC4-201ENST00000347842 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
ASIC4-201ENST00000347842 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
ASIC4-201ENST00000347842 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
ASIC4-201ENST00000347842 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
ASIC4-201ENST00000347842 CUX1P39880 1505 aa24.16■■□□□ 1.46
ASIC4-201ENST00000347842 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
ASIC4-201ENST00000347842 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
ASIC4-201ENST00000347842 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
ASIC4-201ENST00000347842 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
ASIC4-201ENST00000347842 EEA1Q15075 1411 aa24.09■■□□□ 1.45
ASIC4-201ENST00000347842 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
ASIC4-201ENST00000347842 MYT1Q01538 1121 aa24.05■■□□□ 1.44
ASIC4-201ENST00000347842 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.43
ASIC4-201ENST00000347842 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
ASIC4-201ENST00000347842 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
ASIC4-201ENST00000347842 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
ASIC4-201ENST00000347842 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
ASIC4-201ENST00000347842 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
ASIC4-201ENST00000347842 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
ASIC4-201ENST00000347842 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
ASIC4-201ENST00000347842 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
ASIC4-201ENST00000347842 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.41
ASIC4-201ENST00000347842 KIF21BO75037 1637 aa23.86■■□□□ 1.41
ASIC4-201ENST00000347842 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
ASIC4-201ENST00000347842 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
ASIC4-201ENST00000347842 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.41
ASIC4-201ENST00000347842 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
ASIC4-201ENST00000347842 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
ASIC4-201ENST00000347842 WDR62O43379 1518 aa23.82■■□□□ 1.4
ASIC4-201ENST00000347842 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
ASIC4-201ENST00000347842 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
ASIC4-201ENST00000347842 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
ASIC4-201ENST00000347842 CUX2O14529 1486 aa23.72■■□□□ 1.39
ASIC4-201ENST00000347842 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
ASIC4-201ENST00000347842 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
ASIC4-201ENST00000347842 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
ASIC4-201ENST00000347842 CLIP1P30622 1438 aa23.68■■□□□ 1.38
ASIC4-201ENST00000347842 IGF1RP08069 1367 aa23.61■■□□□ 1.37
ASIC4-201ENST00000347842 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
ASIC4-201ENST00000347842 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.37
ASIC4-201ENST00000347842 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
ASIC4-201ENST00000347842 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
ASIC4-201ENST00000347842 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
ASIC4-201ENST00000347842 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
ASIC4-201ENST00000347842 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
ASIC4-201ENST00000347842 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
ASIC4-201ENST00000347842 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
ASIC4-201ENST00000347842 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
ASIC4-201ENST00000347842 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.341e-9■■■■■ 86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms