RNA–Protein interactions for RNA: ENST00000403744.7

PACSIN2-204, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN2, Length 2,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-204ENST00000403744 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
PACSIN2-204ENST00000403744 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
PACSIN2-204ENST00000403744 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
PACSIN2-204ENST00000403744 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
PACSIN2-204ENST00000403744 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
PACSIN2-204ENST00000403744 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
PACSIN2-204ENST00000403744 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
PACSIN2-204ENST00000403744 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
PACSIN2-204ENST00000403744 ABCC9O60706 1549 aa26.94■■□□□ 1.9
PACSIN2-204ENST00000403744 NACADO15069 1562 aa26.85■■□□□ 1.89
PACSIN2-204ENST00000403744 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
PACSIN2-204ENST00000403744 RB1CC1Q8TDY2 1594 aa26.47■■□□□ 1.83
PACSIN2-204ENST00000403744 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.81
PACSIN2-204ENST00000403744 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
PACSIN2-204ENST00000403744 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
PACSIN2-204ENST00000403744 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
PACSIN2-204ENST00000403744 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
PACSIN2-204ENST00000403744 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
PACSIN2-204ENST00000403744 WIZO95785 1651 aa25.84■■□□□ 1.73
PACSIN2-204ENST00000403744 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
PACSIN2-204ENST00000403744 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
PACSIN2-204ENST00000403744 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
PACSIN2-204ENST00000403744 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
PACSIN2-204ENST00000403744 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
PACSIN2-204ENST00000403744 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
PACSIN2-204ENST00000403744 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
PACSIN2-204ENST00000403744 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
PACSIN2-204ENST00000403744 CCDC88BA6NC98 1476 aa25.36■■□□□ 1.65
PACSIN2-204ENST00000403744 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
PACSIN2-204ENST00000403744 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
PACSIN2-204ENST00000403744 MYT1Q01538 1121 aa25.27■■□□□ 1.64
PACSIN2-204ENST00000403744 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
PACSIN2-204ENST00000403744 FAM9AQ8IZU1 332 aaPredicted RBP25.12■■□□□ 1.61
PACSIN2-204ENST00000403744 BAZ1BQ9UIG0 1483 aaKnown RBP25.03■■□□□ 1.6
PACSIN2-204ENST00000403744 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
PACSIN2-204ENST00000403744 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
PACSIN2-204ENST00000403744 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
PACSIN2-204ENST00000403744 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
PACSIN2-204ENST00000403744 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
PACSIN2-204ENST00000403744 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
PACSIN2-204ENST00000403744 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
PACSIN2-204ENST00000403744 SOGA1O94964 1423 aa24.72■■□□□ 1.55
PACSIN2-204ENST00000403744 EEA1Q15075 1411 aa24.72■■□□□ 1.55
PACSIN2-204ENST00000403744 HRCP23327 699 aa24.69■■□□□ 1.54
PACSIN2-204ENST00000403744 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
PACSIN2-204ENST00000403744 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
PACSIN2-204ENST00000403744 RUSC2Q8N2Y8 1516 aa24.6■■□□□ 1.53
PACSIN2-204ENST00000403744 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
PACSIN2-204ENST00000403744 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
PACSIN2-204ENST00000403744 CFTRP13569 1480 aa24.45■■□□□ 1.5
PACSIN2-204ENST00000403744 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
PACSIN2-204ENST00000403744 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
PACSIN2-204ENST00000403744 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
PACSIN2-204ENST00000403744 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
PACSIN2-204ENST00000403744 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
PACSIN2-204ENST00000403744 KIF21BO75037 1637 aa24.35■■□□□ 1.49
PACSIN2-204ENST00000403744 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
PACSIN2-204ENST00000403744 CUX1P39880 1505 aa24.29■■□□□ 1.48
PACSIN2-204ENST00000403744 PRDM2Q13029 1718 aa24.26■■□□□ 1.47
PACSIN2-204ENST00000403744 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
PACSIN2-204ENST00000403744 PPARGC1BQ86YN6 1023 aaKnown RBP24.2■■□□□ 1.46
PACSIN2-204ENST00000403744 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
PACSIN2-204ENST00000403744 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
PACSIN2-204ENST00000403744 PRXQ9BXM0 1461 aa24.1■■□□□ 1.45
PACSIN2-204ENST00000403744 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
PACSIN2-204ENST00000403744 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
PACSIN2-204ENST00000403744 CLIP1P30622 1438 aa24.08■■□□□ 1.44
PACSIN2-204ENST00000403744 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
PACSIN2-204ENST00000403744 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
PACSIN2-204ENST00000403744 VPS8Q8N3P4 1428 aa23.94■■□□□ 1.42
PACSIN2-204ENST00000403744 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
PACSIN2-204ENST00000403744 CUX2O14529 1486 aa23.9■■□□□ 1.42
PACSIN2-204ENST00000403744 NESP48681 1621 aa23.86■■□□□ 1.41
PACSIN2-204ENST00000403744 IGF1RP08069 1367 aa23.86■■□□□ 1.41
PACSIN2-204ENST00000403744 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
PACSIN2-204ENST00000403744 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
PACSIN2-204ENST00000403744 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
PACSIN2-204ENST00000403744 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
PACSIN2-204ENST00000403744 TOPBP1Q92547 1522 aa23.78■■□□□ 1.4
PACSIN2-204ENST00000403744 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
PACSIN2-204ENST00000403744 APLP2Q06481 763 aa23.74■■□□□ 1.39
PACSIN2-204ENST00000403744 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
PACSIN2-204ENST00000403744 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
PACSIN2-204ENST00000403744 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
PACSIN2-204ENST00000403744 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
PACSIN2-204ENST00000403744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
PACSIN2-204ENST00000403744 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
PACSIN2-204ENST00000403744 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
PACSIN2-204ENST00000403744 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
PACSIN2-204ENST00000403744 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
PACSIN2-204ENST00000403744 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
PACSIN2-204ENST00000403744 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
PACSIN2-204ENST00000403744 CUL7Q14999 1698 aa23.51■■□□□ 1.35
PACSIN2-204ENST00000403744 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
PACSIN2-204ENST00000403744 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
PACSIN2-204ENST00000403744 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
PACSIN2-204ENST00000403744 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
PACSIN2-204ENST00000403744 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
PACSIN2-204ENST00000403744 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
PACSIN2-204ENST00000403744 MAP3K1Q13233 1512 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms