Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SND1-IT1Q9HBX3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SND1-IT1Q9HBX3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.52■□□□□ 0.24
SND1-IT1Q9HBX3 AC093323.1-202ENST00000635031 2045 ntBASIC16.52■□□□□ 0.23
SND1-IT1Q9HBX3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SND1-IT1Q9HBX3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SND1-IT1Q9HBX3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SND1-IT1Q9HBX3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.51■□□□□ 0.23
SND1-IT1Q9HBX3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SND1-IT1Q9HBX3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SND1-IT1Q9HBX3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SND1-IT1Q9HBX3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.5■□□□□ 0.23
SND1-IT1Q9HBX3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SND1-IT1Q9HBX3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SND1-IT1Q9HBX3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SND1-IT1Q9HBX3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SND1-IT1Q9HBX3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 AL391121.1-201ENST00000607967 1349 ntBASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SND1-IT1Q9HBX3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SND1-IT1Q9HBX3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SND1-IT1Q9HBX3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
SND1-IT1Q9HBX3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SND1-IT1Q9HBX3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SND1-IT1Q9HBX3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SND1-IT1Q9HBX3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SND1-IT1Q9HBX3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
SND1-IT1Q9HBX3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.45■□□□□ 0.22
SND1-IT1Q9HBX3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SND1-IT1Q9HBX3 DUSP8P4-201ENST00000399538 1761 ntBASIC16.43■□□□□ 0.22
SND1-IT1Q9HBX3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SND1-IT1Q9HBX3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SND1-IT1Q9HBX3 AC018358.1-201ENST00000631079 1402 ntBASIC16.43■□□□□ 0.22
SND1-IT1Q9HBX3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SND1-IT1Q9HBX3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 AC092803.2-201ENST00000564287 1899 ntBASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SND1-IT1Q9HBX3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SND1-IT1Q9HBX3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SND1-IT1Q9HBX3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.41■□□□□ 0.22
SND1-IT1Q9HBX3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SND1-IT1Q9HBX3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SND1-IT1Q9HBX3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms