Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NDNQ99608 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.87■■□□□ 1.57
NDNQ99608 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.87■■□□□ 1.57
NDNQ99608 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.87■■□□□ 1.57
NDNQ99608 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NDNQ99608 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NDNQ99608 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NDNQ99608 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NDNQ99608 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NDNQ99608 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NDNQ99608 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
NDNQ99608 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.85■■□□□ 1.57
NDNQ99608 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NDNQ99608 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NDNQ99608 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.84■■□□□ 1.57
NDNQ99608 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NDNQ99608 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NDNQ99608 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.83■■□□□ 1.57
NDNQ99608 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.83■■□□□ 1.57
NDNQ99608 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NDNQ99608 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.83■■□□□ 1.57
NDNQ99608 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.83■■□□□ 1.57
NDNQ99608 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.56
NDNQ99608 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
NDNQ99608 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
NDNQ99608 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NDNQ99608 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NDNQ99608 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NDNQ99608 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
NDNQ99608 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.82■■□□□ 1.56
NDNQ99608 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.81■■□□□ 1.56
NDNQ99608 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NDNQ99608 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.81■■□□□ 1.56
NDNQ99608 LINC01971-201ENST00000617888 1048 ntBASIC24.8■■□□□ 1.56
NDNQ99608 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.8■■□□□ 1.56
NDNQ99608 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.8■■□□□ 1.56
NDNQ99608 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NDNQ99608 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NDNQ99608 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NDNQ99608 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.79■■□□□ 1.56
NDNQ99608 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.79■■□□□ 1.56
NDNQ99608 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.79■■□□□ 1.56
NDNQ99608 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
NDNQ99608 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NDNQ99608 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.77■■□□□ 1.56
NDNQ99608 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NDNQ99608 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NDNQ99608 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.76■■□□□ 1.55
NDNQ99608 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
NDNQ99608 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
NDNQ99608 AL449106.1-201ENST00000608517 1980 ntBASIC24.75■■□□□ 1.55
NDNQ99608 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NDNQ99608 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
NDNQ99608 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NDNQ99608 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
NDNQ99608 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.75■■□□□ 1.55
NDNQ99608 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.75■■□□□ 1.55
NDNQ99608 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
NDNQ99608 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NDNQ99608 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.75■■□□□ 1.55
NDNQ99608 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NDNQ99608 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.74■■□□□ 1.55
NDNQ99608 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.74■■□□□ 1.55
NDNQ99608 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NDNQ99608 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NDNQ99608 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
NDNQ99608 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NDNQ99608 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NDNQ99608 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.73■■□□□ 1.55
NDNQ99608 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.73■■□□□ 1.55
NDNQ99608 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.72■■□□□ 1.55
NDNQ99608 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NDNQ99608 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
NDNQ99608 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NDNQ99608 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NDNQ99608 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NDNQ99608 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NDNQ99608 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.71■■□□□ 1.55
NDNQ99608 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.71■■□□□ 1.55
NDNQ99608 ZNRF2P2-203ENST00000454624 420 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L13-201ENST00000554103 1267 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L15-201ENST00000611059 1267 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L11-201ENST00000611504 1267 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L12-201ENST00000614593 1267 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L23-201ENST00000615195 1269 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L24-201ENST00000617576 1269 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L22-201ENST00000618238 1269 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L20-201ENST00000619712 1269 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L14-201ENST00000621227 1267 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L21-201ENST00000622058 1269 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L10-201ENST00000622460 1267 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DUX4L25-201ENST00000624915 1269 ntBASIC24.71■■□□□ 1.55
NDNQ99608 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
NDNQ99608 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NDNQ99608 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NDNQ99608 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.69■■□□□ 1.54
NDNQ99608 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.69■■□□□ 1.54
NDNQ99608 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NDNQ99608 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NDNQ99608 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms