Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
ALMS1Q8TCU4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.3■□□□□ 0.36
ALMS1Q8TCU4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ALMS1Q8TCU4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 AC103724.3-201ENST00000564481 992 ntBASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALMS1Q8TCU4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALMS1Q8TCU4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 MIR4508-201ENST00000584178 70 ntBASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 SMPD5-203ENST00000639008 1464 ntBASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 MIR6765-201ENST00000614092 87 ntBASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 AC074183.2-201ENST00000623112 922 ntBASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALMS1Q8TCU4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.23■□□□□ 0.35
ALMS1Q8TCU4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ALMS1Q8TCU4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 AL031848.2-201ENST00000607670 837 ntBASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 AL135925.1-201ENST00000605920 1701 ntBASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.21■□□□□ 0.34
ALMS1Q8TCU4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALMS1Q8TCU4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 AC093536.1-201ENST00000569153 554 ntBASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 AL359258.2-201ENST00000564063 1566 ntBASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms