Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CCDC168Q8NDH2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC168Q8NDH2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC168Q8NDH2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.36■■□□□ 1.01
CCDC168Q8NDH2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC168Q8NDH2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CCDC168Q8NDH2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC168Q8NDH2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC168Q8NDH2 PVT1_1.1-201ENST00000615125 194 ntBASIC21.35■■□□□ 1.01
CCDC168Q8NDH2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC168Q8NDH2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC168Q8NDH2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC168Q8NDH2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC168Q8NDH2 SPCS2P3-201ENST00000500401 656 ntBASIC21.33■■□□□ 1.01
CCDC168Q8NDH2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
CCDC168Q8NDH2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC168Q8NDH2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC168Q8NDH2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC168Q8NDH2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCDC168Q8NDH2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
CCDC168Q8NDH2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.33■■□□□ 1
CCDC168Q8NDH2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.33■■□□□ 1
CCDC168Q8NDH2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC168Q8NDH2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.32■■□□□ 1
CCDC168Q8NDH2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC168Q8NDH2 AC239859.2-201ENST00000444165 318 ntBASIC21.32■■□□□ 1
CCDC168Q8NDH2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC168Q8NDH2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
CCDC168Q8NDH2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.32■■□□□ 1
CCDC168Q8NDH2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.31■■□□□ 1
CCDC168Q8NDH2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.31■■□□□ 1
CCDC168Q8NDH2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC168Q8NDH2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC168Q8NDH2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC168Q8NDH2 AL031848.2-201ENST00000607670 837 ntBASIC21.3■■□□□ 1
CCDC168Q8NDH2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.3■■□□□ 1
CCDC168Q8NDH2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC168Q8NDH2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.3■■□□□ 1
CCDC168Q8NDH2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC168Q8NDH2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.29■■□□□ 1
CCDC168Q8NDH2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC168Q8NDH2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC168Q8NDH2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.29■■□□□ 1
CCDC168Q8NDH2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC168Q8NDH2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC168Q8NDH2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC168Q8NDH2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC168Q8NDH2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.28■■□□□ 1
CCDC168Q8NDH2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CCDC168Q8NDH2 MIR638-201ENST00000385237 100 ntBASIC21.28■■□□□ 1
CCDC168Q8NDH2 Z92544.1-202ENST00000571933 1220 ntBASIC21.28■■□□□ 1
CCDC168Q8NDH2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC168Q8NDH2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCDC168Q8NDH2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.27■■□□□ 1
CCDC168Q8NDH2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC168Q8NDH2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC168Q8NDH2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC168Q8NDH2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC168Q8NDH2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC168Q8NDH2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC168Q8NDH2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC168Q8NDH2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC168Q8NDH2 AL359258.2-201ENST00000564063 1566 ntBASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC168Q8NDH2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC168Q8NDH2 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC168Q8NDH2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC168Q8NDH2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC168Q8NDH2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC168Q8NDH2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC168Q8NDH2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC168Q8NDH2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC168Q8NDH2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC168Q8NDH2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC168Q8NDH2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC168Q8NDH2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC168Q8NDH2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC168Q8NDH2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC168Q8NDH2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC168Q8NDH2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC168Q8NDH2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC168Q8NDH2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CCDC168Q8NDH2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC168Q8NDH2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC168Q8NDH2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC168Q8NDH2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC168Q8NDH2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC168Q8NDH2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC168Q8NDH2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms