Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.29■■■□□ 2.76
LINC00116Q8NCU8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 AC100797.4-201ENST00000631653 1827 ntBASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.28■■■□□ 2.76
LINC00116Q8NCU8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
LINC00116Q8NCU8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
LINC00116Q8NCU8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC32.26■■■□□ 2.75
LINC00116Q8NCU8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.26■■■□□ 2.75
LINC00116Q8NCU8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.26■■■□□ 2.75
LINC00116Q8NCU8 RAP2CP1-202ENST00000605179 643 ntBASIC32.26■■■□□ 2.75
LINC00116Q8NCU8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.26■■■□□ 2.75
LINC00116Q8NCU8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
LINC00116Q8NCU8 RP9P-202ENST00000450133 1212 ntBASIC32.25■■■□□ 2.75
LINC00116Q8NCU8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
LINC00116Q8NCU8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LINC00116Q8NCU8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC32.24■■■□□ 2.75
LINC00116Q8NCU8 AL592295.1-201ENST00000400984 884 ntBASIC32.24■■■□□ 2.75
LINC00116Q8NCU8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
LINC00116Q8NCU8 KRT8P33-201ENST00000508125 1423 ntBASIC32.24■■■□□ 2.75
LINC00116Q8NCU8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
LINC00116Q8NCU8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.23■■■□□ 2.75
LINC00116Q8NCU8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
LINC00116Q8NCU8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
LINC00116Q8NCU8 AC093536.1-201ENST00000569153 554 ntBASIC32.23■■■□□ 2.75
LINC00116Q8NCU8 AP004833.2-201ENST00000532228 1454 ntBASIC32.23■■■□□ 2.75
LINC00116Q8NCU8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
LINC00116Q8NCU8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
LINC00116Q8NCU8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC32.22■■■□□ 2.75
LINC00116Q8NCU8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
LINC00116Q8NCU8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.22■■■□□ 2.75
LINC00116Q8NCU8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
LINC00116Q8NCU8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LINC00116Q8NCU8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LINC00116Q8NCU8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LINC00116Q8NCU8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
LINC00116Q8NCU8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LINC00116Q8NCU8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
LINC00116Q8NCU8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
LINC00116Q8NCU8 BHLHE23-202ENST00000612929 1109 ntBASIC32.2■■■□□ 2.75
LINC00116Q8NCU8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
LINC00116Q8NCU8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.19■■■□□ 2.74
LINC00116Q8NCU8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.19■■■□□ 2.74
LINC00116Q8NCU8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
LINC00116Q8NCU8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
LINC00116Q8NCU8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.19■■■□□ 2.74
LINC00116Q8NCU8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
LINC00116Q8NCU8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.18■■■□□ 2.74
LINC00116Q8NCU8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
LINC00116Q8NCU8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LINC00116Q8NCU8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.17■■■□□ 2.74
LINC00116Q8NCU8 AC009299.2-201ENST00000482477 511 ntBASIC32.17■■■□□ 2.74
LINC00116Q8NCU8 AC103834.1-201ENST00000520383 144 ntBASIC32.17■■■□□ 2.74
LINC00116Q8NCU8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC32.17■■■□□ 2.74
LINC00116Q8NCU8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
LINC00116Q8NCU8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
LINC00116Q8NCU8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
LINC00116Q8NCU8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
LINC00116Q8NCU8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
LINC00116Q8NCU8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.15■■■□□ 2.74
LINC00116Q8NCU8 ST7-AS1-201ENST00000456775 1889 ntBASIC32.15■■■□□ 2.74
LINC00116Q8NCU8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
LINC00116Q8NCU8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.15■■■□□ 2.74
LINC00116Q8NCU8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 PVT1_1.1-201ENST00000615125 194 ntBASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.14■■■□□ 2.74
LINC00116Q8NCU8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.73
LINC00116Q8NCU8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.13■■■□□ 2.73
LINC00116Q8NCU8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
LINC00116Q8NCU8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.13■■■□□ 2.73
LINC00116Q8NCU8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.12■■■□□ 2.73
LINC00116Q8NCU8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
LINC00116Q8NCU8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
LINC00116Q8NCU8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LINC00116Q8NCU8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LINC00116Q8NCU8 AC074183.2-201ENST00000623112 922 ntBASIC32.11■■■□□ 2.73
LINC00116Q8NCU8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LINC00116Q8NCU8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
LINC00116Q8NCU8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.1■■■□□ 2.73
LINC00116Q8NCU8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LINC00116Q8NCU8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.1■■■□□ 2.73
LINC00116Q8NCU8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC32.1■■■□□ 2.73
LINC00116Q8NCU8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.09■■■□□ 2.73
LINC00116Q8NCU8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
LINC00116Q8NCU8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
LINC00116Q8NCU8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.09■■■□□ 2.73
LINC00116Q8NCU8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.07■■■□□ 2.72
LINC00116Q8NCU8 MIR6765-201ENST00000614092 87 ntBASIC32.07■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms