Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AC131212.1-201ENST00000613771 668 ntBASIC26.37■■□□□ 1.81
SMRP1Q8NCR6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMRP1Q8NCR6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMRP1Q8NCR6 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.36■■□□□ 1.81
SMRP1Q8NCR6 SPCS2P3-201ENST00000500401 656 ntBASIC26.36■■□□□ 1.81
SMRP1Q8NCR6 RAP2CP1-202ENST00000605179 643 ntBASIC26.36■■□□□ 1.81
SMRP1Q8NCR6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SMRP1Q8NCR6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMRP1Q8NCR6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.35■■□□□ 1.81
SMRP1Q8NCR6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.34■■□□□ 1.81
SMRP1Q8NCR6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.34■■□□□ 1.81
SMRP1Q8NCR6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.34■■□□□ 1.81
SMRP1Q8NCR6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.34■■□□□ 1.81
SMRP1Q8NCR6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMRP1Q8NCR6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SMRP1Q8NCR6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.33■■□□□ 1.81
SMRP1Q8NCR6 YBX1P4-201ENST00000392794 808 ntBASIC26.33■■□□□ 1.81
SMRP1Q8NCR6 AC103834.1-201ENST00000520383 144 ntBASIC26.33■■□□□ 1.81
SMRP1Q8NCR6 AC093536.1-201ENST00000569153 554 ntBASIC26.33■■□□□ 1.81
SMRP1Q8NCR6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SMRP1Q8NCR6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 GUSBP5-201ENST00000418136 578 ntBASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 THA1P-201ENST00000590384 1145 ntBASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMRP1Q8NCR6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMRP1Q8NCR6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMRP1Q8NCR6 AC139795.1-202ENST00000500444 432 ntBASIC26.3■■□□□ 1.8
SMRP1Q8NCR6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMRP1Q8NCR6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 MIR6765-201ENST00000614092 87 ntBASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.29■■□□□ 1.8
SMRP1Q8NCR6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.28■■□□□ 1.8
SMRP1Q8NCR6 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.28■■□□□ 1.8
SMRP1Q8NCR6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMRP1Q8NCR6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMRP1Q8NCR6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.27■■□□□ 1.8
SMRP1Q8NCR6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMRP1Q8NCR6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
SMRP1Q8NCR6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMRP1Q8NCR6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMRP1Q8NCR6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SMRP1Q8NCR6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SMRP1Q8NCR6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SMRP1Q8NCR6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 PVT1_1.1-201ENST00000615125 194 ntBASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SMRP1Q8NCR6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMRP1Q8NCR6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.24■■□□□ 1.79
SMRP1Q8NCR6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SMRP1Q8NCR6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMRP1Q8NCR6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.23■■□□□ 1.79
SMRP1Q8NCR6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMRP1Q8NCR6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.22■■□□□ 1.79
SMRP1Q8NCR6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.22■■□□□ 1.79
SMRP1Q8NCR6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.22■■□□□ 1.79
SMRP1Q8NCR6 MIR4508-201ENST00000584178 70 ntBASIC26.21■■□□□ 1.79
SMRP1Q8NCR6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMRP1Q8NCR6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.2■■□□□ 1.78
SMRP1Q8NCR6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMRP1Q8NCR6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.2■■□□□ 1.78
SMRP1Q8NCR6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SMRP1Q8NCR6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMRP1Q8NCR6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMRP1Q8NCR6 MIR3960-201ENST00000583311 91 ntBASIC26.19■■□□□ 1.78
SMRP1Q8NCR6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.19■■□□□ 1.78
SMRP1Q8NCR6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMRP1Q8NCR6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMRP1Q8NCR6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.18■■□□□ 1.78
SMRP1Q8NCR6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMRP1Q8NCR6 AP004833.2-201ENST00000532228 1454 ntBASIC26.17■■□□□ 1.78
SMRP1Q8NCR6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMRP1Q8NCR6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMRP1Q8NCR6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.17■■□□□ 1.78
SMRP1Q8NCR6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMRP1Q8NCR6 AC018755.3-202ENST00000596210 929 ntBASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms