Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC39.08■■■■□ 3.85
ABCA9Q8IUA7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC39.07■■■■□ 3.85
ABCA9Q8IUA7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
ABCA9Q8IUA7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC39.07■■■■□ 3.84
ABCA9Q8IUA7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
ABCA9Q8IUA7 HES6-204ENST00000409182 863 ntTSL 2 BASIC39.06■■■■□ 3.84
ABCA9Q8IUA7 AC131212.1-201ENST00000613771 668 ntBASIC39.06■■■■□ 3.84
ABCA9Q8IUA7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
ABCA9Q8IUA7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC39.06■■■■□ 3.84
ABCA9Q8IUA7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC39.06■■■■□ 3.84
ABCA9Q8IUA7 KRT8P33-201ENST00000508125 1423 ntBASIC39.05■■■■□ 3.84
ABCA9Q8IUA7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC39.05■■■■□ 3.84
ABCA9Q8IUA7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC39.05■■■■□ 3.84
ABCA9Q8IUA7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC39.05■■■■□ 3.84
ABCA9Q8IUA7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC39.04■■■■□ 3.84
ABCA9Q8IUA7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC39.04■■■■□ 3.84
ABCA9Q8IUA7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
ABCA9Q8IUA7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC39.04■■■■□ 3.84
ABCA9Q8IUA7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
ABCA9Q8IUA7 AC103834.1-201ENST00000520383 144 ntBASIC39.02■■■■□ 3.84
ABCA9Q8IUA7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
ABCA9Q8IUA7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
ABCA9Q8IUA7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC39.02■■■■□ 3.84
ABCA9Q8IUA7 RP9P-202ENST00000450133 1212 ntBASIC39.01■■■■□ 3.84
ABCA9Q8IUA7 PVT1_1.1-201ENST00000615125 194 ntBASIC39.01■■■■□ 3.84
ABCA9Q8IUA7 AC074183.2-201ENST00000623112 922 ntBASIC39■■■■□ 3.83
ABCA9Q8IUA7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC39■■■■□ 3.83
ABCA9Q8IUA7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC39■■■■□ 3.83
ABCA9Q8IUA7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
ABCA9Q8IUA7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
ABCA9Q8IUA7 MIR4508-201ENST00000584178 70 ntBASIC38.98■■■■□ 3.83
ABCA9Q8IUA7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC38.97■■■■□ 3.83
ABCA9Q8IUA7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC38.97■■■■□ 3.83
ABCA9Q8IUA7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC38.97■■■■□ 3.83
ABCA9Q8IUA7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC38.96■■■■□ 3.83
ABCA9Q8IUA7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
ABCA9Q8IUA7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC38.96■■■■□ 3.83
ABCA9Q8IUA7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC38.96■■■■□ 3.83
ABCA9Q8IUA7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC38.96■■■■□ 3.83
ABCA9Q8IUA7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
ABCA9Q8IUA7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC38.95■■■■□ 3.83
ABCA9Q8IUA7 OR2A1-AS1-204ENST00000470435 602 ntBASIC38.95■■■■□ 3.83
ABCA9Q8IUA7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC38.95■■■■□ 3.83
ABCA9Q8IUA7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC38.94■■■■□ 3.82
ABCA9Q8IUA7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 THA1P-201ENST00000590384 1145 ntBASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
ABCA9Q8IUA7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.92■■■■□ 3.82
ABCA9Q8IUA7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC38.92■■■■□ 3.82
ABCA9Q8IUA7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC38.92■■■■□ 3.82
ABCA9Q8IUA7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
ABCA9Q8IUA7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
ABCA9Q8IUA7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.91■■■■□ 3.82
ABCA9Q8IUA7 MIR6765-201ENST00000614092 87 ntBASIC38.91■■■■□ 3.82
ABCA9Q8IUA7 AL359258.2-201ENST00000564063 1566 ntBASIC38.9■■■■□ 3.82
ABCA9Q8IUA7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC38.9■■■■□ 3.82
ABCA9Q8IUA7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.88■■■■□ 3.81
ABCA9Q8IUA7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
ABCA9Q8IUA7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC38.87■■■■□ 3.81
ABCA9Q8IUA7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC38.86■■■■□ 3.81
ABCA9Q8IUA7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
ABCA9Q8IUA7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC38.86■■■■□ 3.81
ABCA9Q8IUA7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
ABCA9Q8IUA7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.86■■■■□ 3.81
ABCA9Q8IUA7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
ABCA9Q8IUA7 AC139795.1-202ENST00000500444 432 ntBASIC38.85■■■■□ 3.81
ABCA9Q8IUA7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
ABCA9Q8IUA7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.85■■■■□ 3.81
ABCA9Q8IUA7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC38.84■■■■□ 3.81
ABCA9Q8IUA7 AC103724.3-201ENST00000564481 992 ntBASIC38.83■■■■□ 3.81
ABCA9Q8IUA7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC38.82■■■■□ 3.81
ABCA9Q8IUA7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.82■■■■□ 3.81
ABCA9Q8IUA7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.82■■■■□ 3.81
ABCA9Q8IUA7 BHLHE23-202ENST00000612929 1109 ntBASIC38.82■■■■□ 3.81
ABCA9Q8IUA7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC38.82■■■■□ 3.81
ABCA9Q8IUA7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC38.81■■■■□ 3.8
ABCA9Q8IUA7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC38.81■■■■□ 3.8
ABCA9Q8IUA7 YBX1P4-201ENST00000392794 808 ntBASIC38.81■■■■□ 3.8
ABCA9Q8IUA7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC38.81■■■■□ 3.8
ABCA9Q8IUA7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.79■■■■□ 3.8
ABCA9Q8IUA7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
ABCA9Q8IUA7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
ABCA9Q8IUA7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
ABCA9Q8IUA7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA9Q8IUA7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA9Q8IUA7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA9Q8IUA7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA9Q8IUA7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC38.78■■■■□ 3.8
ABCA9Q8IUA7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.78■■■■□ 3.8
ABCA9Q8IUA7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC38.77■■■■□ 3.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms