Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC190Q86UF4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC190Q86UF4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC190Q86UF4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC190Q86UF4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC190Q86UF4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC190Q86UF4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC190Q86UF4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 AC012676.1-201ENST00000574705 1949 ntBASIC21.79■■□□□ 1.08
CCDC190Q86UF4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC190Q86UF4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC190Q86UF4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC190Q86UF4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC190Q86UF4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC190Q86UF4 AC018358.1-201ENST00000631079 1402 ntBASIC21.78■■□□□ 1.08
CCDC190Q86UF4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC190Q86UF4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC190Q86UF4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC190Q86UF4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC190Q86UF4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC190Q86UF4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC190Q86UF4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC190Q86UF4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC190Q86UF4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC190Q86UF4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC190Q86UF4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC190Q86UF4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC190Q86UF4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC190Q86UF4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC190Q86UF4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC190Q86UF4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC190Q86UF4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CCDC190Q86UF4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC190Q86UF4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC190Q86UF4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC190Q86UF4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC190Q86UF4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC190Q86UF4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC190Q86UF4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC190Q86UF4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC190Q86UF4 DYNLL1-208ENST00000550178 581 ntBASIC21.71■■□□□ 1.07
CCDC190Q86UF4 AC142381.3-201ENST00000568208 1670 ntBASIC21.71■■□□□ 1.07
CCDC190Q86UF4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC190Q86UF4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC190Q86UF4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC190Q86UF4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC190Q86UF4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC190Q86UF4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCDC190Q86UF4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC190Q86UF4 AL139125.2-201ENST00000623134 1869 ntBASIC21.69■■□□□ 1.06
CCDC190Q86UF4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC190Q86UF4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC190Q86UF4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC190Q86UF4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC190Q86UF4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC190Q86UF4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC190Q86UF4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC190Q86UF4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CCDC190Q86UF4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC190Q86UF4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC190Q86UF4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC190Q86UF4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC190Q86UF4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC190Q86UF4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC190Q86UF4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC190Q86UF4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC190Q86UF4 AC006077.2-201ENST00000623591 457 ntBASIC21.65■■□□□ 1.06
CCDC190Q86UF4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC190Q86UF4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCDC190Q86UF4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.64■■□□□ 1.06
CCDC190Q86UF4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC190Q86UF4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC190Q86UF4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms