Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SYVN1Q86TM6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SYVN1Q86TM6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SYVN1Q86TM6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SYVN1Q86TM6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.49■■□□□ 1.51
SYVN1Q86TM6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SYVN1Q86TM6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SYVN1Q86TM6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SYVN1Q86TM6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SYVN1Q86TM6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SYVN1Q86TM6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SYVN1Q86TM6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SYVN1Q86TM6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SYVN1Q86TM6 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.47■■□□□ 1.51
SYVN1Q86TM6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.47■■□□□ 1.51
SYVN1Q86TM6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SYVN1Q86TM6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SYVN1Q86TM6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.47■■□□□ 1.51
SYVN1Q86TM6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SYVN1Q86TM6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SYVN1Q86TM6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SYVN1Q86TM6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SYVN1Q86TM6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SYVN1Q86TM6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYVN1Q86TM6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.43■■□□□ 1.5
SYVN1Q86TM6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.43■■□□□ 1.5
SYVN1Q86TM6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SYVN1Q86TM6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SYVN1Q86TM6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.42■■□□□ 1.5
SYVN1Q86TM6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SYVN1Q86TM6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SYVN1Q86TM6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SYVN1Q86TM6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SYVN1Q86TM6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.41■■□□□ 1.5
SYVN1Q86TM6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYVN1Q86TM6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SYVN1Q86TM6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SYVN1Q86TM6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SYVN1Q86TM6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SYVN1Q86TM6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.4■■□□□ 1.5
SYVN1Q86TM6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SYVN1Q86TM6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.39■■□□□ 1.49
SYVN1Q86TM6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SYVN1Q86TM6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SYVN1Q86TM6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.38■■□□□ 1.49
SYVN1Q86TM6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.38■■□□□ 1.49
SYVN1Q86TM6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SYVN1Q86TM6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.38■■□□□ 1.49
SYVN1Q86TM6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SYVN1Q86TM6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYVN1Q86TM6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYVN1Q86TM6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYVN1Q86TM6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SYVN1Q86TM6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SYVN1Q86TM6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
SYVN1Q86TM6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SYVN1Q86TM6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.33■■□□□ 1.49
SYVN1Q86TM6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.33■■□□□ 1.49
SYVN1Q86TM6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.33■■□□□ 1.48
SYVN1Q86TM6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SYVN1Q86TM6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SYVN1Q86TM6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.32■■□□□ 1.48
SYVN1Q86TM6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SYVN1Q86TM6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.31■■□□□ 1.48
SYVN1Q86TM6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.31■■□□□ 1.48
SYVN1Q86TM6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
SYVN1Q86TM6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms