Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CNTNAP1P78357 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CNTNAP1P78357 AC133552.2-201ENST00000619106 1032 ntBASIC30.29■■■□□ 2.44
CNTNAP1P78357 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.29■■■□□ 2.44
CNTNAP1P78357 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CNTNAP1P78357 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CNTNAP1P78357 AC010980.1-201ENST00000587192 1142 ntBASIC30.28■■■□□ 2.44
CNTNAP1P78357 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.28■■■□□ 2.44
CNTNAP1P78357 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.28■■■□□ 2.44
CNTNAP1P78357 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.27■■■□□ 2.44
CNTNAP1P78357 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CNTNAP1P78357 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
CNTNAP1P78357 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CNTNAP1P78357 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.27■■■□□ 2.44
CNTNAP1P78357 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CNTNAP1P78357 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CNTNAP1P78357 AL157400.5-201ENST00000507624 621 ntBASIC30.26■■■□□ 2.43
CNTNAP1P78357 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CNTNAP1P78357 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CNTNAP1P78357 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CNTNAP1P78357 AL356441.2-201ENST00000443009 864 ntBASIC30.25■■■□□ 2.43
CNTNAP1P78357 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CNTNAP1P78357 ST7-AS1-201ENST00000456775 1889 ntBASIC30.25■■■□□ 2.43
CNTNAP1P78357 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CNTNAP1P78357 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
CNTNAP1P78357 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.24■■■□□ 2.43
CNTNAP1P78357 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CNTNAP1P78357 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CNTNAP1P78357 AC025884.2-201ENST00000553429 711 ntBASIC30.23■■■□□ 2.43
CNTNAP1P78357 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.22■■■□□ 2.43
CNTNAP1P78357 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.22■■■□□ 2.43
CNTNAP1P78357 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CNTNAP1P78357 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CNTNAP1P78357 BHLHE23-202ENST00000612929 1109 ntBASIC30.21■■■□□ 2.43
CNTNAP1P78357 AC126177.7-201ENST00000547904 679 ntBASIC30.2■■■□□ 2.43
CNTNAP1P78357 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.2■■■□□ 2.43
CNTNAP1P78357 AC074183.2-201ENST00000623112 922 ntBASIC30.2■■■□□ 2.43
CNTNAP1P78357 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.19■■■□□ 2.42
CNTNAP1P78357 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.19■■■□□ 2.42
CNTNAP1P78357 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CNTNAP1P78357 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
CNTNAP1P78357 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.17■■■□□ 2.42
CNTNAP1P78357 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CNTNAP1P78357 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.17■■■□□ 2.42
CNTNAP1P78357 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CNTNAP1P78357 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
CNTNAP1P78357 YBX1P4-201ENST00000392794 808 ntBASIC30.16■■■□□ 2.42
CNTNAP1P78357 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CNTNAP1P78357 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CNTNAP1P78357 AC103834.1-201ENST00000520383 144 ntBASIC30.16■■■□□ 2.42
CNTNAP1P78357 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.16■■■□□ 2.42
CNTNAP1P78357 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.16■■■□□ 2.42
CNTNAP1P78357 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.16■■■□□ 2.42
CNTNAP1P78357 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.15■■■□□ 2.42
CNTNAP1P78357 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CNTNAP1P78357 AP004833.2-201ENST00000532228 1454 ntBASIC30.15■■■□□ 2.42
CNTNAP1P78357 DUX4L9-201ENST00000449051 1259 ntBASIC30.15■■■□□ 2.42
CNTNAP1P78357 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.14■■■□□ 2.42
CNTNAP1P78357 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.14■■■□□ 2.42
CNTNAP1P78357 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.14■■■□□ 2.42
CNTNAP1P78357 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.14■■■□□ 2.41
CNTNAP1P78357 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CNTNAP1P78357 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.13■■■□□ 2.41
CNTNAP1P78357 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CNTNAP1P78357 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.13■■■□□ 2.41
CNTNAP1P78357 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.13■■■□□ 2.41
CNTNAP1P78357 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
CNTNAP1P78357 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.13■■■□□ 2.41
CNTNAP1P78357 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CNTNAP1P78357 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.12■■■□□ 2.41
CNTNAP1P78357 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CNTNAP1P78357 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CNTNAP1P78357 AC100797.4-201ENST00000631653 1827 ntBASIC30.11■■■□□ 2.41
CNTNAP1P78357 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CNTNAP1P78357 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CNTNAP1P78357 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CNTNAP1P78357 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CNTNAP1P78357 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CNTNAP1P78357 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.1■■■□□ 2.41
CNTNAP1P78357 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.1■■■□□ 2.41
CNTNAP1P78357 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CNTNAP1P78357 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CNTNAP1P78357 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.09■■■□□ 2.41
CNTNAP1P78357 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.08■■■□□ 2.41
CNTNAP1P78357 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CNTNAP1P78357 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.08■■■□□ 2.41
CNTNAP1P78357 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CNTNAP1P78357 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CNTNAP1P78357 AC008406.3-201ENST00000620001 1374 ntBASIC30.07■■■□□ 2.4
CNTNAP1P78357 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CNTNAP1P78357 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
CNTNAP1P78357 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.07■■■□□ 2.4
CNTNAP1P78357 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.06■■■□□ 2.4
CNTNAP1P78357 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.06■■■□□ 2.4
CNTNAP1P78357 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.06■■■□□ 2.4
CNTNAP1P78357 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CNTNAP1P78357 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.06■■■□□ 2.4
CNTNAP1P78357 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CNTNAP1P78357 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.05■■■□□ 2.4
CNTNAP1P78357 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms