Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5BP61020 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB5BP61020 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5BP61020 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5BP61020 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5BP61020 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5BP61020 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.64■□□□□ 0.74
RAB5BP61020 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB5BP61020 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB5BP61020 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB5BP61020 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB5BP61020 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RAB5BP61020 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5BP61020 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB5BP61020 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5BP61020 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5BP61020 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5BP61020 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB5BP61020 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5BP61020 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5BP61020 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5BP61020 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5BP61020 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RAB5BP61020 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5BP61020 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RAB5BP61020 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB5BP61020 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB5BP61020 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB5BP61020 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5BP61020 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB5BP61020 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5BP61020 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5BP61020 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB5BP61020 AC068473.5-201ENST00000616428 2072 ntBASIC19.6■□□□□ 0.73
RAB5BP61020 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RAB5BP61020 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RAB5BP61020 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB5BP61020 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB5BP61020 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5BP61020 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5BP61020 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5BP61020 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5BP61020 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB5BP61020 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5BP61020 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RAB5BP61020 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5BP61020 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.57■□□□□ 0.72
RAB5BP61020 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5BP61020 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5BP61020 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5BP61020 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5BP61020 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB5BP61020 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5BP61020 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RAB5BP61020 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB5BP61020 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB5BP61020 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB5BP61020 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB5BP61020 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB5BP61020 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB5BP61020 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5BP61020 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5BP61020 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB5BP61020 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5BP61020 PKD1P6-201ENST00000343738 4769 ntBASIC19.53■□□□□ 0.72
RAB5BP61020 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5BP61020 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5BP61020 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RAB5BP61020 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RAB5BP61020 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB5BP61020 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5BP61020 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5BP61020 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5BP61020 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB5BP61020 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RAB5BP61020 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5BP61020 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5BP61020 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5BP61020 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5BP61020 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5BP61020 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
RAB5BP61020 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5BP61020 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
RAB5BP61020 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5BP61020 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5BP61020 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB5BP61020 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5BP61020 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5BP61020 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms