Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.38■■□□□ 1.33
MT-ND1P03886 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MT-ND1P03886 AC005559.1-201ENST00000589661 871 ntBASIC23.38■■□□□ 1.33
MT-ND1P03886 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MT-ND1P03886 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
MT-ND1P03886 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
MT-ND1P03886 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND1P03886 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.37■■□□□ 1.33
MT-ND1P03886 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.36■■□□□ 1.33
MT-ND1P03886 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND1P03886 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND1P03886 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND1P03886 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.36■■□□□ 1.33
MT-ND1P03886 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND1P03886 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
MT-ND1P03886 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.36■■□□□ 1.33
MT-ND1P03886 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND1P03886 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND1P03886 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND1P03886 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND1P03886 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND1P03886 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.35■■□□□ 1.33
MT-ND1P03886 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND1P03886 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MT-ND1P03886 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MT-ND1P03886 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-ND1P03886 AC135983.2-203ENST00000454486 1613 ntBASIC23.33■■□□□ 1.32
MT-ND1P03886 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
MT-ND1P03886 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND1P03886 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MT-ND1P03886 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
MT-ND1P03886 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MT-ND1P03886 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
MT-ND1P03886 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MT-ND1P03886 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.31■■□□□ 1.32
MT-ND1P03886 WHAMMP2-203ENST00000563942 1603 ntBASIC23.3■■□□□ 1.32
MT-ND1P03886 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.3■■□□□ 1.32
MT-ND1P03886 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.3■■□□□ 1.32
MT-ND1P03886 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MT-ND1P03886 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.29■■□□□ 1.32
MT-ND1P03886 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MT-ND1P03886 AC092803.2-201ENST00000564287 1899 ntBASIC23.29■■□□□ 1.32
MT-ND1P03886 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.29■■□□□ 1.32
MT-ND1P03886 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
MT-ND1P03886 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND1P03886 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-ND1P03886 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.28■■□□□ 1.32
MT-ND1P03886 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.28■■□□□ 1.32
MT-ND1P03886 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND1P03886 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
MT-ND1P03886 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND1P03886 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND1P03886 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.27■■□□□ 1.32
MT-ND1P03886 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-ND1P03886 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
MT-ND1P03886 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND1P03886 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND1P03886 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MT-ND1P03886 DUSP8P4-201ENST00000399538 1761 ntBASIC23.26■■□□□ 1.31
MT-ND1P03886 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
MT-ND1P03886 AC108673.1-201ENST00000510422 1159 ntBASIC23.25■■□□□ 1.31
MT-ND1P03886 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND1P03886 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MT-ND1P03886 AC093323.1-202ENST00000635031 2045 ntBASIC23.25■■□□□ 1.31
MT-ND1P03886 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND1P03886 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND1P03886 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND1P03886 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-ND1P03886 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND1P03886 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
MT-ND1P03886 DUX4L28-201ENST00000623687 678 ntBASIC23.23■■□□□ 1.31
MT-ND1P03886 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-ND1P03886 AP004609.3-201ENST00000610705 1884 ntBASIC23.22■■□□□ 1.31
MT-ND1P03886 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.22■■□□□ 1.31
MT-ND1P03886 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.22■■□□□ 1.31
MT-ND1P03886 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND1P03886 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-ND1P03886 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.21■■□□□ 1.31
MT-ND1P03886 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND1P03886 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND1P03886 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND1P03886 MIR3665-201ENST00000578708 105 ntBASIC23.21■■□□□ 1.31
MT-ND1P03886 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.21■■□□□ 1.31
MT-ND1P03886 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND1P03886 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND1P03886 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-ND1P03886 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.21■■□□□ 1.31
MT-ND1P03886 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-ND1P03886 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-ND1P03886 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.19■■□□□ 1.3
MT-ND1P03886 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MT-ND1P03886 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
MT-ND1P03886 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms