Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC18O15417 AC005837.3-201ENST00000612163 286 ntBASIC28.25■■■□□ 2.11
TNRC18O15417 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC18O15417 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC18O15417 ZNRF2P3-201ENST00000424200 374 ntBASIC28.24■■■□□ 2.11
TNRC18O15417 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.24■■■□□ 2.11
TNRC18O15417 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TNRC18O15417 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TNRC18O15417 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TNRC18O15417 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.22■■■□□ 2.11
TNRC18O15417 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.22■■■□□ 2.11
TNRC18O15417 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
TNRC18O15417 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.22■■■□□ 2.11
TNRC18O15417 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.21■■■□□ 2.11
TNRC18O15417 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
TNRC18O15417 AC135983.2-203ENST00000454486 1613 ntBASIC28.2■■■□□ 2.1
TNRC18O15417 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TNRC18O15417 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TNRC18O15417 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.2■■■□□ 2.1
TNRC18O15417 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
TNRC18O15417 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.2■■■□□ 2.1
TNRC18O15417 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.19■■■□□ 2.1
TNRC18O15417 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.19■■■□□ 2.1
TNRC18O15417 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TNRC18O15417 AC110285.7-201ENST00000624417 1536 ntBASIC28.19■■■□□ 2.1
TNRC18O15417 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TNRC18O15417 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC28.18■■■□□ 2.1
TNRC18O15417 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TNRC18O15417 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.18■■■□□ 2.1
TNRC18O15417 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.18■■■□□ 2.1
TNRC18O15417 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
TNRC18O15417 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.17■■■□□ 2.1
TNRC18O15417 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
TNRC18O15417 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.17■■■□□ 2.1
TNRC18O15417 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.17■■■□□ 2.1
TNRC18O15417 AC135279.3-201ENST00000610945 1311 ntBASIC28.16■■■□□ 2.1
TNRC18O15417 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TNRC18O15417 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
TNRC18O15417 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
TNRC18O15417 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.16■■■□□ 2.1
TNRC18O15417 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TNRC18O15417 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
TNRC18O15417 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TNRC18O15417 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.15■■■□□ 2.1
TNRC18O15417 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.14■■■□□ 2.1
TNRC18O15417 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.14■■■□□ 2.1
TNRC18O15417 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.13■■■□□ 2.09
TNRC18O15417 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.13■■■□□ 2.09
TNRC18O15417 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TNRC18O15417 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TNRC18O15417 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.13■■■□□ 2.09
TNRC18O15417 UNC93B8-201ENST00000511903 705 ntBASIC28.13■■■□□ 2.09
TNRC18O15417 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
TNRC18O15417 AC126177.7-201ENST00000547904 679 ntBASIC28.12■■■□□ 2.09
TNRC18O15417 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.12■■■□□ 2.09
TNRC18O15417 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TNRC18O15417 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TNRC18O15417 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
TNRC18O15417 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.12■■■□□ 2.09
TNRC18O15417 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.12■■■□□ 2.09
TNRC18O15417 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
TNRC18O15417 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
TNRC18O15417 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TNRC18O15417 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TNRC18O15417 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.09■■■□□ 2.09
TNRC18O15417 MIR5787-201ENST00000611784 55 ntBASIC28.09■■■□□ 2.09
TNRC18O15417 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.09■■■□□ 2.09
TNRC18O15417 AC093536.1-201ENST00000569153 554 ntBASIC28.09■■■□□ 2.09
TNRC18O15417 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TNRC18O15417 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TNRC18O15417 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TNRC18O15417 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.08■■■□□ 2.09
TNRC18O15417 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TNRC18O15417 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TNRC18O15417 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TNRC18O15417 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.06■■■□□ 2.08
TNRC18O15417 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TNRC18O15417 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
TNRC18O15417 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TNRC18O15417 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TNRC18O15417 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.06■■■□□ 2.08
TNRC18O15417 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
TNRC18O15417 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.05■■■□□ 2.08
TNRC18O15417 MIR4787-201ENST00000607364 84 ntBASIC28.05■■■□□ 2.08
TNRC18O15417 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
TNRC18O15417 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
TNRC18O15417 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TNRC18O15417 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC28.04■■■□□ 2.08
TNRC18O15417 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TNRC18O15417 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TNRC18O15417 LONRF2P2-201ENST00000439212 571 ntBASIC28.04■■■□□ 2.08
TNRC18O15417 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC28.04■■■□□ 2.08
TNRC18O15417 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TNRC18O15417 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TNRC18O15417 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
TNRC18O15417 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.03■■■□□ 2.08
TNRC18O15417 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TNRC18O15417 KRT16P3-201ENST00000439127 1283 ntBASIC28.03■■■□□ 2.08
TNRC18O15417 AC133561.4-201ENST00000566112 224 ntBASIC28.02■■■□□ 2.08
TNRC18O15417 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms